RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CASZ1Q86V15 1759 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 SPAG17Q6Q759 2223 aa0.29□□□□□ -2.36
CCDC7-209ENST00000539197 MYH1P12882 1939 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 NINQ8N4C6 2090 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 RBAKDNA6NC62 111 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 IL5P05113 134 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 SLC48A1Q6P1K1 146 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 COX7B2Q8TF08 81 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 C10orf82Q8WW14 230 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 PFDN5Q99471 154 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 TMEM242Q9NWH2 141 aa0.28□□□□□ -2.36
CCDC7-209ENST00000539197 ANKRD17O75179 2603 aaKnown RBP0.28□□□□□ -2.37
CCDC7-209ENST00000539197 ABCA4P78363 2273 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 RREB1Q92766 1687 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 F2Z2F3 143 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 SSBP1Q04837 148 aaKnown RBP0.27□□□□□ -2.37
CCDC7-209ENST00000539197 S100A7L2Q5SY68 101 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 RPL7L1Q6DKI1 246 aaKnown RBP0.27□□□□□ -2.37
CCDC7-209ENST00000539197 KCNRGQ8N5I3 272 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 Q96NJ1 140 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 RPRMQ9NS64 109 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 DLEC1Q9Y238 1755 aa0.27□□□□□ -2.37
CCDC7-209ENST00000539197 GVQW2A0A096LPI5 108 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-209ENST00000539197 A6NIN4 97 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 NDUFA2O43678 99 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 SNCGO76070 127 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 CCDC58Q4VC31 144 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 SCIMPQ6UWF3 145 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 VMO1Q7Z5L0 202 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 SPTSSBQ8NFR3 76 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 TCEAL4Q96EI5 215 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 FAM107BQ9H098 131 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 V9GYV3 84 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 SSPOA2VEC9 5147 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 CEP152O94986 1710 aa0.26□□□□□ -2.37
CCDC7-209ENST00000539197 TRBV7-1A0A0A6YYK4 115 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 CLPSL1A2RUU4 121 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 PIPP12273 146 aaPredicted RBP0.25□□□□□ -2.37
CCDC7-209ENST00000539197 HIST1H1DP16402 221 aaKnown RBP0.25□□□□□ -2.37
CCDC7-209ENST00000539197 GUCA1AP43080 201 aaPredicted RBP0.25□□□□□ -2.37
CCDC7-209ENST00000539197 ARPC4P59998 168 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 S100A12P80511 92 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 FAM74A4Q5TZK3 123 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 SPTSSAQ969W0 71 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 DPH3Q96FX2 82 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 PRR15LQ9BU68 103 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 BPESC1Q9GZL8 116 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 TMEM191AQ9H0A3 160 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 PROK2Q9HC23 129 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 ABCA1O95477 2261 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 ESPL1Q14674 2120 aa0.25□□□□□ -2.37
CCDC7-209ENST00000539197 BCORL1Q5H9F3 1711 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 BDP1A6H8Y1 2624 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 CACNA1EQ15878 2313 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 TMEM2Q9UHN6 1383 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 TRGV1A0A0A0MS02 117 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 MCRIP1C9JLW8 97 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 NDUFB6O95139 128 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 UBE2D1P51668 147 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 SEC11CQ9BY50 192 aa0.24□□□□□ -2.37
CCDC7-209ENST00000539197 ADGRB1O14514 1584 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 MAST4O15021 2626 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 IBTKQ9P2D0 1353 aaPredicted RBP0.23□□□□□ -2.37
CCDC7-209ENST00000539197 AFDNP55196 1824 aaKnown RBP0.23□□□□□ -2.37
CCDC7-209ENST00000539197 GNG7O60262 68 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 ACYP2P14621 99 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 CBLN1P23435 193 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 EDDM3BP56851 147 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 SMIM11BQ8TCY0 68 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 PDCD10Q9BUL8 212 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 CCDC167Q9P0B6 97 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 PAIP2BQ9ULR5 123 aaKnown RBP0.23□□□□□ -2.37
CCDC7-209ENST00000539197 JMJD1CQ15652 2540 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
CCDC7-209ENST00000539197 IFNA17P01571 189 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 HMGN1P05114 100 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 NMBP08949 121 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 SELENOWP63302 87 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 Q6ZRX8 168 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 ARL11Q969Q4 196 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 LINC00470Q9BZP3 86 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 ATG2AQ2TAZ0 1938 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 CDK5RAP2Q96SN8 1893 aa0.22□□□□□ -2.37
CCDC7-209ENST00000539197 FAM25AB3EWG3 89 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 FAM25CB3EWG5 89 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 FAM25GB3EWG6 89 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 APODP05090 189 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 RBM3P98179 157 aaKnown RBP0.21□□□□□ -2.38
CCDC7-209ENST00000539197 LSM10Q969L4 123 aaKnown RBP0.21□□□□□ -2.38
CCDC7-209ENST00000539197 TSC22D3Q99576 134 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 WFDC6Q9BQY6 131 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 AGPAT4-IT1Q9H0P7 198 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 LINC00312Q9Y6C7 94 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 CDK13Q14004 1512 aaKnown RBP0.21□□□□□ -2.38
CCDC7-209ENST00000539197 RBBP6Q7Z6E9 1792 aaKnown RBP0.21□□□□□ -2.38
CCDC7-209ENST00000539197 FAT4Q6V0I7 4981 aa0.21□□□□□ -2.38
CCDC7-209ENST00000539197 TANC1Q9C0D5 1861 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 BICRAQ9NZM4 1560 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms