RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 RASL10AQ92737 203 aa11.09□□□□□ -0.63
VAMP1-207ENST00000539047 MRAP2Q96G30 205 aa11.09□□□□□ -0.63
VAMP1-207ENST00000539047 OVOL2Q9BRP0 275 aa11.09□□□□□ -0.63
VAMP1-207ENST00000539047 TMA7Q9Y2S6 64 aaKnown RBP11.09□□□□□ -0.63
VAMP1-207ENST00000539047 F5H697 171 aa11.08□□□□□ -0.64
VAMP1-207ENST00000539047 CKS2P33552 79 aa11.08□□□□□ -0.64
VAMP1-207ENST00000539047 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
VAMP1-207ENST00000539047 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
VAMP1-207ENST00000539047 A0A087WWL8 130 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 H7C1H1 209 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 CIDEAO60543 219 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 PPP1R17O96001 155 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
VAMP1-207ENST00000539047 Q6ZTI0 123 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 OR4C5Q8NGB2 326 aa11.07□□□□□ -0.64
VAMP1-207ENST00000539047 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 GAGE7O76087 117 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 RAB4AP20338 218 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 SRIP30626 198 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 Q8NAQ8 132 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 RETNQ9HD89 108 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
VAMP1-207ENST00000539047 PRKDCP78527 4128 aaKnown RBP11.06□□□□□ -0.64
VAMP1-207ENST00000539047 D6R8Y8 96 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 RS1O15537 224 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 S100A6P06703 90 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 ZFP2Q6ZN57 461 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 SBSPONQ8IVN8 264 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 JPT2Q9H910 190 aa11.05□□□□□ -0.64
VAMP1-207ENST00000539047 FAM222AQ5U5X8 452 aa11.04□□□□□ -0.64
VAMP1-207ENST00000539047 CFAP126Q5VTH2 177 aa11.04□□□□□ -0.64
VAMP1-207ENST00000539047 RNF185Q96GF1 192 aa11.04□□□□□ -0.64
VAMP1-207ENST00000539047 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 CRYGDP07320 174 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 DAD1P61803 113 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 ALKBH7Q9BT30 221 aaPredicted RBP11.03□□□□□ -0.64
VAMP1-207ENST00000539047 KIF25-AS1Q9Y6Z4 181 aa11.03□□□□□ -0.64
VAMP1-207ENST00000539047 PHOX2AO14813 284 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 DEFB4AO15263 64 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 NCR2O95944 276 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 MAP1LC3AQ9H492 121 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 DKK2Q9UBU2 259 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 U3KQK5 164 aa11.02□□□□□ -0.65
VAMP1-207ENST00000539047 IGHV3-73A0A0B4J1V6 119 aa11.01□□□□□ -0.65
VAMP1-207ENST00000539047 TRGV4A0A0C4DH28 118 aa11.01□□□□□ -0.65
VAMP1-207ENST00000539047 SUMO4Q6EEV6 95 aa11.01□□□□□ -0.65
VAMP1-207ENST00000539047 BAGE3Q86Y29 109 aa11.01□□□□□ -0.65
VAMP1-207ENST00000539047 LINC00612Q8N6U2 182 aa11.01□□□□□ -0.65
VAMP1-207ENST00000539047 POM121L12Q8N7R1 296 aa11.01□□□□□ -0.65
VAMP1-207ENST00000539047 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
VAMP1-207ENST00000539047 NACAE9PAV3 2078 aa11□□□□□ -0.65
VAMP1-207ENST00000539047 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
VAMP1-207ENST00000539047 SMKR1H3BMG3 65 aa11□□□□□ -0.65
VAMP1-207ENST00000539047 IGHV3-53P01767 116 aa11□□□□□ -0.65
VAMP1-207ENST00000539047 C18orf15Q96N68 181 aa11□□□□□ -0.65
VAMP1-207ENST00000539047 TNFRSF6BO95407 300 aa10.99□□□□□ -0.65
VAMP1-207ENST00000539047 PMCHP20382 165 aa10.99□□□□□ -0.65
VAMP1-207ENST00000539047 NDUFA6P56556 154 aa10.99□□□□□ -0.65
VAMP1-207ENST00000539047 C18orf32Q8TCD1 76 aa10.99□□□□□ -0.65
VAMP1-207ENST00000539047 NPYP01303 97 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 LINC00315P59091 139 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 Q0VG73 95 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 PRSS3P2Q8NHM4 247 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 ZNF479Q96JC4 524 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 ST20Q9HBF5 79 aa10.98□□□□□ -0.65
VAMP1-207ENST00000539047 K7EQD1 137 aa10.97□□□□□ -0.65
VAMP1-207ENST00000539047 ATP5G1P05496 136 aa10.97□□□□□ -0.65
VAMP1-207ENST00000539047 FA2HQ7L5A8 372 aa10.97□□□□□ -0.65
VAMP1-207ENST00000539047 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
VAMP1-207ENST00000539047 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
VAMP1-207ENST00000539047 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
VAMP1-207ENST00000539047 A0A0J9YWU9 116 aa10.96□□□□□ -0.65
VAMP1-207ENST00000539047 TRBV10-1A0A0K0K1A3 114 aa10.96□□□□□ -0.65
VAMP1-207ENST00000539047 M0QY20 66 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms