RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 LY6G6DO95868 133 aa15.2■□□□□ 0.02
SMPDL3A-203ENST00000539041 RBMY1A1P0DJD3 496 aaKnown RBP15.2■□□□□ 0.02
SMPDL3A-203ENST00000539041 RBMY1CP0DJD4 496 aa15.2■□□□□ 0.02
SMPDL3A-203ENST00000539041 RBMY1FQ15415 496 aaKnown RBP15.2■□□□□ 0.02
SMPDL3A-203ENST00000539041 JPT2Q9H910 190 aa15.2■□□□□ 0.02
SMPDL3A-203ENST00000539041 WNK1Q9H4A3 2382 aa15.18■□□□□ 0.02
SMPDL3A-203ENST00000539041 CBY3A6NI87 242 aa15.18■□□□□ 0.02
SMPDL3A-203ENST00000539041 K7EMI3 77 aa15.18■□□□□ 0.02
SMPDL3A-203ENST00000539041 A0A087WWL8 130 aa15.17■□□□□ 0.02
SMPDL3A-203ENST00000539041 ATP5LO75964 103 aa15.17■□□□□ 0.02
SMPDL3A-203ENST00000539041 ORMDL2Q53FV1 153 aa15.17■□□□□ 0.02
SMPDL3A-203ENST00000539041 SUMO4Q6EEV6 95 aa15.17■□□□□ 0.02
SMPDL3A-203ENST00000539041 GCN1Q92616 2671 aaKnown RBP15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 FASNP49327 2511 aaKnown RBP15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 A0A1B0GV90 55 aa15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 NUDT3O95989 172 aa15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 PROK1P58294 105 aa15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 ODF3L2Q3SX64 289 aa15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 CLUHP3Q96NS8 147 aa15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 MRPS16Q9Y3D3 137 aaKnown RBP15.16■□□□□ 0.02
SMPDL3A-203ENST00000539041 RPL32P62910 135 aaKnown RBP15.15■□□□□ 0.02
SMPDL3A-203ENST00000539041 F5H697 171 aa15.14■□□□□ 0.01
SMPDL3A-203ENST00000539041 PRSS1P07477 247 aa15.14■□□□□ 0.01
SMPDL3A-203ENST00000539041 FAM74A4Q5TZK3 123 aa15.13■□□□□ 0.01
SMPDL3A-203ENST00000539041 SLC25A34Q6PIV7 304 aa15.13■□□□□ 0.01
SMPDL3A-203ENST00000539041 CSTL1Q9H114 145 aa15.13■□□□□ 0.01
SMPDL3A-203ENST00000539041 ADARB2-AS1A8MUL3 147 aa15.13■□□□□ 0.01
SMPDL3A-203ENST00000539041 ODF1Q14990 250 aa15.13■□□□□ 0.01
SMPDL3A-203ENST00000539041 DKK2Q9UBU2 259 aa15.13■□□□□ 0.01
SMPDL3A-203ENST00000539041 CRYGDP07320 174 aa15.12■□□□□ 0.01
SMPDL3A-203ENST00000539041 ZNF876PQ49A33 203 aa15.12■□□□□ 0.01
SMPDL3A-203ENST00000539041 LURAP1LQ8IV03 231 aa15.12■□□□□ 0.01
SMPDL3A-203ENST00000539041 OR11H12B2RN74 326 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 INSP01308 110 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 ZNF56Q15929 161 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 LINC00467Q9BRT7 94 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 HTN1P15515 57 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 ZNF415Q09FC8 603 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 BATFQ16520 125 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 NSUN5P1Q3KNT7 163 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 STHQ8IWL8 128 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 TOMM6Q96B49 74 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 ZMAT4Q9H898 229 aa15.11■□□□□ 0.01
SMPDL3A-203ENST00000539041 NACAE9PAV3 2078 aa15.1■□□□□ 0.01
SMPDL3A-203ENST00000539041 SAP30O75446 220 aa15.1■□□□□ 0.01
SMPDL3A-203ENST00000539041 COX8AP10176 69 aa15.1■□□□□ 0.01
SMPDL3A-203ENST00000539041 POLR2KP53803 58 aaKnown RBP15.1■□□□□ 0.01
SMPDL3A-203ENST00000539041 ANKRD39Q53RE8 183 aa15.1■□□□□ 0.01
SMPDL3A-203ENST00000539041 TRBV6-5A0A0K0K1A5 114 aa15.09■□□□□ 0.01
SMPDL3A-203ENST00000539041 NUTF2P61970 127 aaKnown RBP15.09■□□□□ 0.01
SMPDL3A-203ENST00000539041 TP73-AS1Q9UF72 201 aa15.09■□□□□ 0.01
SMPDL3A-203ENST00000539041 HIVEP2P31629 2446 aa15.09■□□□□ 0.01
SMPDL3A-203ENST00000539041 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.08■□□□□ 0.01
SMPDL3A-203ENST00000539041 CMC4P56277 68 aaPredicted RBP15.08■□□□□ 0.01
SMPDL3A-203ENST00000539041 LINC01587Q99440 93 aa15.08■□□□□ 0.01
SMPDL3A-203ENST00000539041 MTORP42345 2549 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 NF1P21359 2839 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 M0QY20 66 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 VCYO14598 125 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 IGKCP01834 107 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 C2orf66Q6UXQ4 117 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 NEGR1Q7Z3B1 354 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 TRPT1Q86TN4 253 aaKnown RBP15.07■□□□□ 0
SMPDL3A-203ENST00000539041 STPG4Q8N801 248 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 SCGB3A1Q96QR1 104 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 CUBNO60494 3623 aa15.07■□□□□ 0
SMPDL3A-203ENST00000539041 SDHAF1A6NFY7 115 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 M0R2P5 195 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 PTH2Q96A98 100 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 DPM2O94777 84 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 IGLV1-51P01701 117 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 G0S2P27469 103 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 PIK3CD-AS1Q5SR53 167 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 MORN3Q6PF18 240 aaPredicted RBP15.06■□□□□ 0
SMPDL3A-203ENST00000539041 NDUFA11Q86Y39 141 aa15.06■□□□□ 0
SMPDL3A-203ENST00000539041 A0A087WX48 190 aa15.05■□□□□ -0
SMPDL3A-203ENST00000539041 INAFM1C9JVW0 142 aa15.05■□□□□ -0
SMPDL3A-203ENST00000539041 KIR2DL4Q99706 377 aa15.05■□□□□ -0
SMPDL3A-203ENST00000539041 TRAV12-1A0A0B4J245 112 aa15.04■□□□□ -0
SMPDL3A-203ENST00000539041 PRM2P04554 102 aa15.04■□□□□ -0
SMPDL3A-203ENST00000539041 HINT1P49773 126 aaPredicted RBP15.04■□□□□ -0
SMPDL3A-203ENST00000539041 KRTAP10-3P60369 221 aa15.04■□□□□ -0
SMPDL3A-203ENST00000539041 COL5A1-AS1Q5SY13 56 aa15.04■□□□□ -0
SMPDL3A-203ENST00000539041 XCL2Q9UBD3 114 aa15.04■□□□□ -0
SMPDL3A-203ENST00000539041 TRBV27A0A0K0K1C4 114 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 LINC01549A6NIU2 74 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 A8MWV9 139 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 ZFP2Q6ZN57 461 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 C11orf72Q8NBR9 251 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 SPXQ9BT56 116 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 FGF6P10767 208 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 EDA2RQ9HAV5 297 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 MRPL35Q9NZE8 188 aaKnown RBP15.03■□□□□ -0
SMPDL3A-203ENST00000539041 CYSLTR1Q9Y271 337 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 HECTD1Q9ULT8 2610 aa15.03■□□□□ -0
SMPDL3A-203ENST00000539041 ERASQ7Z444 233 aa15.02□□□□□ -0.01
SMPDL3A-203ENST00000539041 FAM110AQ9BQ89 295 aa15.02□□□□□ -0.01
SMPDL3A-203ENST00000539041 HHLA3Q9XRX5 114 aa15.02□□□□□ -0.01
SMPDL3A-203ENST00000539041 H7C1H1 209 aa15.01□□□□□ -0.01
SMPDL3A-203ENST00000539041 RIPPLY3P57055 190 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms