RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TRGV2A0A075B6R0 118 aa10.12□□□□□ -0.79
CD4-208ENST00000538827 MT-ND6P03923 174 aa10.12□□□□□ -0.79
CD4-208ENST00000538827 EVI2AP22794 236 aa10.12□□□□□ -0.79
CD4-208ENST00000538827 FAM222AQ5U5X8 452 aa10.12□□□□□ -0.79
CD4-208ENST00000538827 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
CD4-208ENST00000538827 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
CD4-208ENST00000538827 DPH3P1Q9H4G8 78 aa10.12□□□□□ -0.79
CD4-208ENST00000538827 DNAH9Q9NYC9 4486 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 APCSP02743 223 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 DEFB130BP0DP73 79 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 DEFB130AP0DP74 79 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 FABP9Q0Z7S8 132 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 ZNF56Q15929 161 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 GATD1Q8NB37 220 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 PTH2Q96A98 100 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 TMEM191AQ9H0A3 160 aa10.11□□□□□ -0.79
CD4-208ENST00000538827 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
CD4-208ENST00000538827 A8MWV9 139 aa10.1□□□□□ -0.79
CD4-208ENST00000538827 SLAQ13239 276 aa10.1□□□□□ -0.79
CD4-208ENST00000538827 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
CD4-208ENST00000538827 SAMD10Q9BYL1 202 aa10.1□□□□□ -0.79
CD4-208ENST00000538827 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
CD4-208ENST00000538827 DYNC2H1Q8NCM8 4307 aaKnown RBP10.1□□□□□ -0.79
CD4-208ENST00000538827 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 LYRM9A8MSI8 78 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 F5H697 171 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 C3orf84H3BNL1 204 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 RS1O15537 224 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 TRGC2P03986 189 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 KIAA1644Q3SXP7 199 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 OR4C5Q8NGB2 326 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 RASL10AQ92737 203 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
CD4-208ENST00000538827 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
CD4-208ENST00000538827 TRAV4A0A0B4J268 109 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 NCR2O95944 276 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 SPART-AS1P0CW21 52 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 DAD1P61803 113 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 CFAP126Q5VTH2 177 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 FAM104BQ5XKR9 115 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
CD4-208ENST00000538827 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
CD4-208ENST00000538827 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
CD4-208ENST00000538827 SMKR1H3BMG3 65 aa10.07□□□□□ -0.8
CD4-208ENST00000538827 RHODO00212 210 aa10.07□□□□□ -0.8
CD4-208ENST00000538827 RAB4AP20338 218 aa10.07□□□□□ -0.8
CD4-208ENST00000538827 MRPL51Q4U2R6 128 aaKnown RBP10.07□□□□□ -0.8
CD4-208ENST00000538827 RNF185Q96GF1 192 aa10.07□□□□□ -0.8
CD4-208ENST00000538827 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
CD4-208ENST00000538827 D6R8Y8 96 aa10.06□□□□□ -0.8
CD4-208ENST00000538827 CRYGDP07320 174 aa10.06□□□□□ -0.8
CD4-208ENST00000538827 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
CD4-208ENST00000538827 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
CD4-208ENST00000538827 KIF25-AS1Q9Y6Z4 181 aa10.06□□□□□ -0.8
CD4-208ENST00000538827 TENM2Q9NT68 2774 aa10.06□□□□□ -0.8
CD4-208ENST00000538827 CKS2P33552 79 aa10.05□□□□□ -0.8
CD4-208ENST00000538827 LINC00612Q8N6U2 182 aa10.05□□□□□ -0.8
CD4-208ENST00000538827 POM121L12Q8N7R1 296 aa10.05□□□□□ -0.8
CD4-208ENST00000538827 HUWE1Q7Z6Z7 4374 aaKnown RBP10.05□□□□□ -0.8
CD4-208ENST00000538827 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
CD4-208ENST00000538827 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
CD4-208ENST00000538827 HTN3P15516 51 aa10.04□□□□□ -0.8
CD4-208ENST00000538827 SRIP30626 198 aa10.04□□□□□ -0.8
CD4-208ENST00000538827 ORMDL3Q8N138 153 aa10.04□□□□□ -0.8
CD4-208ENST00000538827 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
CD4-208ENST00000538827 TMA7Q9Y2S6 64 aaKnown RBP10.04□□□□□ -0.8
CD4-208ENST00000538827 LINC00315P59091 139 aa10.03□□□□□ -0.8
CD4-208ENST00000538827 RAB5BP61020 215 aa10.03□□□□□ -0.8
CD4-208ENST00000538827 UFSP1Q6NVU6 142 aa10.03□□□□□ -0.8
CD4-208ENST00000538827 PRELID3AQ96N28 172 aa10.03□□□□□ -0.8
CD4-208ENST00000538827 GATA1P15976 413 aaPredicted RBP10.02□□□□□ -0.81
CD4-208ENST00000538827 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.81
CD4-208ENST00000538827 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
CD4-208ENST00000538827 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
CD4-208ENST00000538827 K7EQD1 137 aa10.01□□□□□ -0.81
CD4-208ENST00000538827 GAS8-AS1O95177 125 aa10.01□□□□□ -0.81
CD4-208ENST00000538827 NPYP01303 97 aa10.01□□□□□ -0.81
CD4-208ENST00000538827 ATP5G1P05496 136 aa10.01□□□□□ -0.81
CD4-208ENST00000538827 NHLRC4P0CG21 123 aaPredicted RBP10.01□□□□□ -0.81
CD4-208ENST00000538827 NANOS2P60321 138 aaKnown RBP10.01□□□□□ -0.81
CD4-208ENST00000538827 C11orf45Q8TAV5 145 aa10.01□□□□□ -0.81
CD4-208ENST00000538827 RPL39LQ96EH5 51 aaKnown RBP10.01□□□□□ -0.81
CD4-208ENST00000538827 H7C1H1 209 aa10□□□□□ -0.81
CD4-208ENST00000538827 PHOX2AO14813 284 aa10□□□□□ -0.81
CD4-208ENST00000538827 PPBPP02775 128 aa10□□□□□ -0.81
CD4-208ENST00000538827 P0DMU3 169 aa10□□□□□ -0.81
CD4-208ENST00000538827 FAM231AP0DMU4 169 aa10□□□□□ -0.81
CD4-208ENST00000538827 FAM231CP0DMU5 169 aa10□□□□□ -0.81
CD4-208ENST00000538827 IQCJQ1A5X6 159 aa10□□□□□ -0.81
CD4-208ENST00000538827 C12orf74Q32Q52 190 aa10□□□□□ -0.81
CD4-208ENST00000538827 Q6ZSN1 163 aa10□□□□□ -0.81
CD4-208ENST00000538827 C18orf15Q96N68 181 aa10□□□□□ -0.81
CD4-208ENST00000538827 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
CD4-208ENST00000538827 U3KQK5 164 aa10□□□□□ -0.81
CD4-208ENST00000538827 F5H768 121 aa9.99□□□□□ -0.81
CD4-208ENST00000538827 CIDEAO60543 219 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms