RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 TNRC6BQ9UPQ9 1833 aaKnown RBP8.59□□□□□ -1.03
LINC00346-201ENST00000538077 CHKB-CPT1BH3BT56 60 aa8.59□□□□□ -1.03
LINC00346-201ENST00000538077 C20orf144Q9BQM9 153 aa8.59□□□□□ -1.03
LINC00346-201ENST00000538077 INTS1Q8N201 2190 aaKnown RBP8.59□□□□□ -1.03
LINC00346-201ENST00000538077 DENND4AQ7Z401 1863 aa8.59□□□□□ -1.03
LINC00346-201ENST00000538077 ZNF843Q8N446 348 aa8.59□□□□□ -1.03
LINC00346-201ENST00000538077 CEMP1Q6PRD7 247 aaPredicted RBP8.58□□□□□ -1.04
LINC00346-201ENST00000538077 K7EP34 96 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 NDUFA1O15239 70 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 CACNA1DQ01668 2161 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 A6NDX4 124 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 ETDBQ3ZM63 59 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 GAGE12HA6NDE8 117 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 IGKV1-17P01599 117 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 HERV-K104P63124 156 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 SPANXDQ9BXN6 97 aa8.58□□□□□ -1.04
LINC00346-201ENST00000538077 OPRPNQ99935 248 aaPredicted RBP8.58□□□□□ -1.04
LINC00346-201ENST00000538077 Q6ZVH6 145 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 NTN5Q8WTR8 489 aaPredicted RBP8.57□□□□□ -1.04
LINC00346-201ENST00000538077 PPDPFLQ8WWR9 84 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 F8W1H4 67 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 TMEM61Q8N0U2 210 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 M0R2N4 97 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 NDUFA11Q86Y39 141 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 TMEM131Q92545 1883 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 ZNF407Q9C0G0 2248 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 ARFGEF3Q5TH69 2177 aa8.57□□□□□ -1.04
LINC00346-201ENST00000538077 K7EP13 123 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 CCL25O15444 150 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 CFC1BP0CG36 223 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 CFC1P0CG37 223 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 SH2D6Q7Z4S9 175 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 Q8NFD4 153 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 LY6G6DO95868 133 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 LYPD6BQ8NI32 183 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 SPAG11BQ08648 103 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 ANKRD29Q8N6D5 301 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 ZNF747Q9BV97 191 aa8.56□□□□□ -1.04
LINC00346-201ENST00000538077 IGHG2P01859 326 aa8.55□□□□□ -1.04
LINC00346-201ENST00000538077 FUSP35637 526 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC00346-201ENST00000538077 BAALCQ8WXS3 180 aa8.55□□□□□ -1.04
LINC00346-201ENST00000538077 PRO3102Q9H379 93 aa8.55□□□□□ -1.04
LINC00346-201ENST00000538077 IGLV2-14P01704 120 aa8.55□□□□□ -1.04
LINC00346-201ENST00000538077 ALPK3Q96L96 1907 aa8.55□□□□□ -1.04
LINC00346-201ENST00000538077 GPHB5Q86YW7 130 aa8.54□□□□□ -1.04
LINC00346-201ENST00000538077 A0A096LNI7 61 aa8.54□□□□□ -1.04
LINC00346-201ENST00000538077 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
LINC00346-201ENST00000538077 IGLV2-18A0A075B6J9 118 aa8.54□□□□□ -1.04
LINC00346-201ENST00000538077 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
LINC00346-201ENST00000538077 C10orf99Q6UWK7 81 aa8.54□□□□□ -1.04
LINC00346-201ENST00000538077 SPATA25Q9BR10 227 aa8.54□□□□□ -1.04
LINC00346-201ENST00000538077 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
LINC00346-201ENST00000538077 TMEM263Q8WUH6 116 aaKnown RBP8.53□□□□□ -1.04
LINC00346-201ENST00000538077 H0Y9J4 135 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 Q6YL49 198 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 LINC00269Q8N2A0 174 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 B5MCH6 92 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 DOCK11Q5JSL3 2073 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 CDPF1Q6NVV7 123 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 CCDC140Q96MF4 163 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 USF3Q68DE3 2245 aa8.53□□□□□ -1.04
LINC00346-201ENST00000538077 CRYGDP07320 174 aa8.52□□□□□ -1.04
LINC00346-201ENST00000538077 LOXL1Q08397 574 aaPredicted RBP8.52□□□□□ -1.04
LINC00346-201ENST00000538077 Q6ZTI0 123 aa8.52□□□□□ -1.04
LINC00346-201ENST00000538077 CLEC2BQ92478 149 aa8.52□□□□□ -1.04
LINC00346-201ENST00000538077 C14orf132Q9NPU4 83 aa8.52□□□□□ -1.04
LINC00346-201ENST00000538077 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 C22orf34Q6ZV56 151 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 SPRY4Q9C004 299 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 EML6Q6ZMW3 1958 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 FAM186AA6NE01 2351 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 DIDO1Q9BTC0 2240 aaKnown RBP8.52□□□□□ -1.05
LINC00346-201ENST00000538077 K7EMT4 169 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 WFDC9Q8NEX5 89 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
LINC00346-201ENST00000538077 IGLV1-47P01700 117 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 FAM222AQ5U5X8 452 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 B9D2Q9BPU9 175 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 NUPR1O60356 82 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 NDUFB1O75438 58 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 DEFB131BA0A096LNP1 70 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 LECT2O14960 151 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 HILS1P60008 231 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 C10orf91Q5T1B1 145 aa8.51□□□□□ -1.05
LINC00346-201ENST00000538077 A4D1N5 150 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 NFE4Q86UQ8 179 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 TMEM258P61165 79 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 FAM167A-AS1Q96KT0 104 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 A0A0J9YX75 114 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 Q6ZUT4 128 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms