RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 CELSR2Q9HCU4 2923 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 MALRD1Q5VYJ5 2156 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 IGHV3-72A0A0B4J1Y9 119 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 FAM240AA0A1B0GVK7 77 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 K7EIM0 57 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 RPL7P18124 248 aaKnown RBP8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 CNTFRP26992 372 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 TMEM263Q8WUH6 116 aaKnown RBP8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 SMIM9A6NGZ8 99 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 WIPF1O43516 503 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 CFHR4Q92496 578 aa8.66□□□□□ -1.02
SEMA4D-221ENST00000537934 TENM4Q6N022 2769 aa8.65□□□□□ -1.02
SEMA4D-221ENST00000537934 ZNF56Q15929 161 aa8.65□□□□□ -1.02
SEMA4D-221ENST00000537934 PAPPA-AS1Q5QFB9 102 aa8.65□□□□□ -1.02
SEMA4D-221ENST00000537934 LRRC75A-AS1Q8N1F1 130 aa8.65□□□□□ -1.02
SEMA4D-221ENST00000537934 USP9YO00507 2555 aaPredicted RBP8.65□□□□□ -1.02
SEMA4D-221ENST00000537934 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.03
SEMA4D-221ENST00000537934 A0A0B4J2C4 111 aa8.65□□□□□ -1.03
SEMA4D-221ENST00000537934 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.03
SEMA4D-221ENST00000537934 HES1Q14469 280 aa8.65□□□□□ -1.03
SEMA4D-221ENST00000537934 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.03
SEMA4D-221ENST00000537934 A4D1N5 150 aa8.64□□□□□ -1.03
SEMA4D-221ENST00000537934 NDUFA7O95182 113 aa8.64□□□□□ -1.03
SEMA4D-221ENST00000537934 SLC50A1Q9BRV3 221 aa8.64□□□□□ -1.03
SEMA4D-221ENST00000537934 FBN2P35556 2912 aa8.64□□□□□ -1.03
SEMA4D-221ENST00000537934 EIF4EBP3O60516 100 aaPredicted RBP8.64□□□□□ -1.03
SEMA4D-221ENST00000537934 EBI3Q14213 229 aa8.64□□□□□ -1.03
SEMA4D-221ENST00000537934 SPANXDQ9BXN6 97 aa8.64□□□□□ -1.03
SEMA4D-221ENST00000537934 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 ELANEP08246 267 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 C3orf22Q8N5N4 141 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 POLQO75417 2590 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 LOC107984640A0A0U1RRK4 108 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 NPFFO15130 113 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 IGHV4-39P01824 125 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 CRYGDP07320 174 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 IMUPQ9GZP8 106 aa8.63□□□□□ -1.03
SEMA4D-221ENST00000537934 ARHGAP32A7KAX9 2087 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 A0A1B0GX51 115 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 J3KT08 172 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 NDUFB3O43676 98 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 DEFB121Q5J5C9 76 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 DYNAPQ8N1N2 210 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 H7C2G1 150 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 SPANXN1Q5VSR9 72 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 IGFL4Q6B9Z1 124 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 C2orf82Q6UX34 121 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 AMELXQ99217 191 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 C11orf21Q9P2W6 132 aa8.62□□□□□ -1.03
SEMA4D-221ENST00000537934 TRAV25A0A0B4J276 109 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 KAAG1Q9UBP8 84 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 SMAD5-AS1Q9Y6J3 95 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 PTPN13Q12923 2485 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 HELZ2Q9BYK8 2649 aaKnown RBP8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 OOSP1A8MZH6 123 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 UQCRQO14949 82 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 ABCA12Q86UK0 2595 aa8.61□□□□□ -1.03
SEMA4D-221ENST00000537934 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 FAM236AA0A1B0GUQ0 79 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 FAM236BA0A1B0GV22 79 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 H3BT86 120 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 HERVK_113P63121 156 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 Q1RN00 199 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 ABCA1O95477 2261 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 TRGV11A0A075B6L2 103 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 H7C423 109 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 EMP1P54849 157 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 LINC00526Q96FQ7 95 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
SEMA4D-221ENST00000537934 WNK2Q9Y3S1 2297 aa8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 J3QQQ9 107 aa8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 DLX1P56177 255 aa8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 RPS28P62857 69 aaKnown RBP8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 C14orf178Q8N769 122 aaPredicted RBP8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 PRAC2D3DTV9 90 aa8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 DLX6P56179 175 aa8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 PRB3Q04118 309 aaPredicted RBP8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 PMVKQ15126 192 aa8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 DUX3Q96PT4 197 aa8.59□□□□□ -1.03
SEMA4D-221ENST00000537934 IGHV1-69DA0A0B4J2H0 117 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 TRIAP1O43715 76 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 TSHBP01222 138 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 DOPEY2Q9Y3R5 2298 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 IGHV1-8P0DP01 117 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 MFAP4P55083 255 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms