RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
SNX17-210ENST00000537606 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
SNX17-210ENST00000537606 SMIM17P0DL12 118 aa12.9□□□□□ -0.34
SNX17-210ENST00000537606 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
SNX17-210ENST00000537606 A0A087WWL8 130 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 RBMY1BA6NDE4 496 aaKnown RBP12.89□□□□□ -0.35
SNX17-210ENST00000537606 RBMY1EA6NEQ0 496 aaKnown RBP12.89□□□□□ -0.35
SNX17-210ENST00000537606 NUDT3O95989 172 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 RBMY1DP0C7P1 496 aaKnown RBP12.89□□□□□ -0.35
SNX17-210ENST00000537606 LAGE3Q14657 143 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 DEFB104AQ8WTQ1 72 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 MRAP2Q96G30 205 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 MAP6D1Q9H9H5 199 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 IGHV1OR15-1A0A075B7D0 117 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 IGHV3-16A0A0C4DH30 117 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 H3BMM0 161 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 COX8AP10176 69 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 HILS1P60008 231 aa12.89□□□□□ -0.35
SNX17-210ENST00000537606 FHL3Q13643 280 aa12.88□□□□□ -0.35
SNX17-210ENST00000537606 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
SNX17-210ENST00000537606 ODF1Q14990 250 aa12.88□□□□□ -0.35
SNX17-210ENST00000537606 SMIM2Q9BVW6 85 aa12.88□□□□□ -0.35
SNX17-210ENST00000537606 C16orf95Q9H693 158 aa12.88□□□□□ -0.35
SNX17-210ENST00000537606 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
SNX17-210ENST00000537606 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
SNX17-210ENST00000537606 PRSS47A8MTI9 375 aa12.87□□□□□ -0.35
SNX17-210ENST00000537606 SUMO2P61956 95 aaKnown RBP12.87□□□□□ -0.35
SNX17-210ENST00000537606 C2orf91Q6ZV80 131 aa12.87□□□□□ -0.35
SNX17-210ENST00000537606 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
SNX17-210ENST00000537606 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
SNX17-210ENST00000537606 JMJD1CQ15652 2540 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 FGF6P10767 208 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 KIF25-AS1Q9Y6Z4 181 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 NXPH4O95158 308 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 NPSP0C0P6 89 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 LINC00315P59091 139 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 DEFB125Q8N687 156 aa12.86□□□□□ -0.35
SNX17-210ENST00000537606 CBY3A6NI87 242 aa12.85□□□□□ -0.35
SNX17-210ENST00000537606 NSUN5P1Q3KNT7 163 aa12.85□□□□□ -0.35
SNX17-210ENST00000537606 C9orf85Q96MD7 179 aa12.85□□□□□ -0.35
SNX17-210ENST00000537606 NOTCH3Q9UM47 2321 aa12.85□□□□□ -0.35
SNX17-210ENST00000537606 NMUP48645 174 aa12.84□□□□□ -0.35
SNX17-210ENST00000537606 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
SNX17-210ENST00000537606 F5H697 171 aa12.84□□□□□ -0.35
SNX17-210ENST00000537606 DLEU1O43261 78 aa12.84□□□□□ -0.35
SNX17-210ENST00000537606 BVES-AS1Q5T3Y7 98 aa12.84□□□□□ -0.35
SNX17-210ENST00000537606 TRAV2A0A0B4J234 112 aa12.83□□□□□ -0.35
SNX17-210ENST00000537606 ERASQ7Z444 233 aa12.83□□□□□ -0.35
SNX17-210ENST00000537606 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.35
SNX17-210ENST00000537606 ODF3L2Q3SX64 289 aa12.83□□□□□ -0.36
SNX17-210ENST00000537606 TTTY13Q9BZ97 58 aa12.83□□□□□ -0.36
SNX17-210ENST00000537606 TMEM160Q9NX00 188 aa12.83□□□□□ -0.36
SNX17-210ENST00000537606 FN1P02751 2386 aaKnown RBP12.83□□□□□ -0.36
SNX17-210ENST00000537606 HHLA3Q9XRX5 114 aa12.82□□□□□ -0.36
SNX17-210ENST00000537606 IGKV2D-26A0A0A0MRZ7 120 aa12.82□□□□□ -0.36
SNX17-210ENST00000537606 INAFM1C9JVW0 142 aa12.82□□□□□ -0.36
SNX17-210ENST00000537606 SUMO4Q6EEV6 95 aa12.82□□□□□ -0.36
SNX17-210ENST00000537606 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
SNX17-210ENST00000537606 HIVEP1P15822 2718 aa12.82□□□□□ -0.36
SNX17-210ENST00000537606 ZNF876PQ49A33 203 aa12.81□□□□□ -0.36
SNX17-210ENST00000537606 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
SNX17-210ENST00000537606 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
SNX17-210ENST00000537606 ATP5LO75964 103 aa12.81□□□□□ -0.36
SNX17-210ENST00000537606 PROK1P58294 105 aa12.81□□□□□ -0.36
SNX17-210ENST00000537606 C20orf78Q9BR46 151 aa12.81□□□□□ -0.36
SNX17-210ENST00000537606 NSD1Q96L73 2696 aaPredicted RBP12.8□□□□□ -0.36
SNX17-210ENST00000537606 SAP30O75446 220 aa12.8□□□□□ -0.36
SNX17-210ENST00000537606 IGKCP01834 107 aa12.8□□□□□ -0.36
SNX17-210ENST00000537606 GTSCR1Q86UQ5 136 aa12.8□□□□□ -0.36
SNX17-210ENST00000537606 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
SNX17-210ENST00000537606 A8MTW9 85 aa12.8□□□□□ -0.36
SNX17-210ENST00000537606 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
SNX17-210ENST00000537606 C2CD3Q4AC94 2353 aa12.79□□□□□ -0.36
SNX17-210ENST00000537606 SYT8Q8NBV8 401 aa12.79□□□□□ -0.36
SNX17-210ENST00000537606 CRYGDP07320 174 aa12.79□□□□□ -0.36
SNX17-210ENST00000537606 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
SNX17-210ENST00000537606 POM121L12Q8N7R1 296 aa12.79□□□□□ -0.36
SNX17-210ENST00000537606 XCL2Q9UBD3 114 aa12.79□□□□□ -0.36
SNX17-210ENST00000537606 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 DPM2O94777 84 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 ZNF56Q15929 161 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 ORMDL2Q53FV1 153 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 ZC2HC1BQ5TFG8 222 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 C12orf54Q6X4T0 127 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 SCGB3A1Q96QR1 104 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 COX11Q9Y6N1 276 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.78□□□□□ -0.36
SNX17-210ENST00000537606 LINC01587Q99440 93 aa12.78□□□□□ -0.36
SNX17-210ENST00000537606 IGHV3-73A0A0B4J1V6 119 aa12.77□□□□□ -0.37
SNX17-210ENST00000537606 C2orf66Q6UXQ4 117 aa12.77□□□□□ -0.37
SNX17-210ENST00000537606 TOMM6Q96B49 74 aa12.77□□□□□ -0.37
SNX17-210ENST00000537606 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
SNX17-210ENST00000537606 NDUFA7O95182 113 aa12.77□□□□□ -0.37
SNX17-210ENST00000537606 A0A087WX48 190 aa12.76□□□□□ -0.37
SNX17-210ENST00000537606 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
SNX17-210ENST00000537606 STHQ8IWL8 128 aa12.76□□□□□ -0.37
SNX17-210ENST00000537606 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms