RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 IGKV3-7A0A075B6H7 116 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 RBAKDNA6NC62 111 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 HCRTO43612 131 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 C5orf38Q86SI9 138 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 AQP10Q96PS8 301 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 SNHG12Q9BXW3 62 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 ADAMTS7Q9UKP4 1686 aa1.26□□□□□ -2.21
SRGAP1-203ENST00000537585 NUMA1Q14980 2115 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 TENM1Q9UKZ4 2725 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 MRC2Q9UBG0 1479 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 CCDC88CQ9P219 2028 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 PLXNA3P51805 1871 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 IGLV3-32A0A0A0MS00 114 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 TRAV2A0A0B4J234 112 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 TRBV10-3A0A0K0K1G6 114 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 CXorf51AA0A1B0GTR3 108 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 IGKV2-29A2NJV5 120 aaPredicted RBP1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 UBE2L3P68036 154 aaKnown RBP1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 GDF5OSQ5U4N7 250 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 SFTA2Q6UW10 78 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 C20orf197Q8N268 126 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 ZNF563Q8TA94 476 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 MYOZ3Q8TDC0 251 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 ODF3Q96PU9 254 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 VAMP8Q9BV40 100 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 DPH3P1Q9H4G8 78 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 LINC00474Q9P2X8 69 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 LINC00312Q9Y6C7 94 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 DOCK10Q96BY6 2186 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 RAPGEF6Q8TEU7 1601 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 SCN3AQ9NY46 2000 aa1.25□□□□□ -2.21
SRGAP1-203ENST00000537585 FOCADQ5VW36 1801 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 FASNP49327 2511 aaKnown RBP1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 PCLOQ9Y6V0 5065 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 USP54Q70EL1 1684 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 IGKV3D-7A0A0C4DH55 119 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 IGKV3OR2-268A0A0C4DH90 116 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 TEX49A0A1B0GTD5 131 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 UBE2L5PA0A1B0GUS4 154 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 A0A1W2PPM0 123 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 HIGD1CA8MV81 97 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 MT-ATP8P03928 68 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 DCDP81605 110 aaKnown RBP1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 MANBALQ9NQG1 85 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 MYO18BQ8IUG5 2567 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 MYO9BQ13459 2157 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 DNHD1Q96M86 4753 aa1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 LAMA2P24043 3122 aaKnown RBP1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 HEATR1Q9H583 2144 aaKnown RBP1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 RBBP6Q7Z6E9 1792 aaKnown RBP1.24□□□□□ -2.21
SRGAP1-203ENST00000537585 UNC80Q8N2C7 3258 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 FANCMQ8IYD8 2048 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 KIAA1549Q9HCM3 1950 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 ZFHX2Q9C0A1 2572 aaPredicted RBP1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 MYH7P12883 1935 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 TOP2BQ02880 1626 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 A0A0J9YY99 117 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 TMEM262E9PQX1 116 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 FREM3P0C091 2139 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 PDE6GP18545 87 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 ZNF56Q15929 161 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 PMCHL2Q9BQD1 86 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 PRO1933Q9H354 126 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 ITPR3Q14573 2671 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 EYSQ5T1H1 3165 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 EPG5Q9HCE0 2579 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 PTPRMP28827 1452 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 ABCC10Q5T3U5 1492 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 PIEZO1Q92508 2521 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 ZNF292O60281 2723 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 MYH1P12882 1939 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 FREM1Q5H8C1 2179 aa1.23□□□□□ -2.21
SRGAP1-203ENST00000537585 LTBP2Q14767 1821 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 ADGRB1O14514 1584 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 ASH1LQ9NR48 2969 aaKnown RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 IGKV2-40A0A087WW87 121 aaPredicted RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 hADV29S1A0JD25 119 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 CRYM-AS1A6NIL9 109 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 INE1O15225 51 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 SSSCA1O60232 199 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 MRPS14O60783 128 aaKnown RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 IGKV2D-40P01614 121 aaPredicted RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 IGHV3-30P01768 117 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 IGHV3-30-5P0DP03 117 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 FAUP35544 74 aaKnown RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 SSBP1Q04837 148 aaKnown RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 COMMD6Q7Z4G1 85 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 SBSPONQ8IVN8 264 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 C4orf33Q8N1A6 199 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 FAM213BQ8TBF2 198 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 DPY30Q9C005 99 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 MED9Q9NWA0 146 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 C22orf24Q9Y442 160 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 CFAP47Q6ZTR5 3102 aa1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 RIMS1Q86UR5 1692 aaKnown RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 CPSF1Q10570 1443 aaKnown RBP1.22□□□□□ -2.21
SRGAP1-203ENST00000537585 NHSL1Q5SYE7 1610 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms