RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 IGLV4-69A0A075B6H9 119 aa10.65□□□□□ -0.7
USP44-203ENST00000537435 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
USP44-203ENST00000537435 SNRPD3P62318 126 aaKnown RBP10.65□□□□□ -0.7
USP44-203ENST00000537435 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
USP44-203ENST00000537435 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
USP44-203ENST00000537435 A0A1B0GWB2 263 aa10.65□□□□□ -0.7
USP44-203ENST00000537435 LGALS9O00182 355 aa10.65□□□□□ -0.7
USP44-203ENST00000537435 PKD1L2Q7Z442 2459 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 K7EQG2 157 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 COX6B1P14854 86 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 RPL24P83731 157 aaKnown RBP10.64□□□□□ -0.71
USP44-203ENST00000537435 PMVKQ15126 192 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 SCGB1D4Q6XE38 83 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 PLEKHB2Q96CS7 222 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 Q8N1Y9 231 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 KLHL30-AS1Q8NEE0 82 aa10.64□□□□□ -0.71
USP44-203ENST00000537435 DSCR9P59020 149 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 SPINK13Q1W4C9 94 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 TMEM141Q96I45 108 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
USP44-203ENST00000537435 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 TMEM89A2RUT3 159 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 ZNF56Q15929 161 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 LINC01356Q8N9X3 169 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 SYT8Q8NBV8 401 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 TIMM17AQ99595 171 aa10.63□□□□□ -0.71
USP44-203ENST00000537435 H3BMG7 143 aa10.62□□□□□ -0.71
USP44-203ENST00000537435 HERVK_113P61574 105 aa10.62□□□□□ -0.71
USP44-203ENST00000537435 MORN3Q6PF18 240 aaPredicted RBP10.62□□□□□ -0.71
USP44-203ENST00000537435 AMTNQ6UX39 209 aa10.62□□□□□ -0.71
USP44-203ENST00000537435 DUX5Q96PT3 197 aa10.62□□□□□ -0.71
USP44-203ENST00000537435 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
USP44-203ENST00000537435 IGHV1OR15-1A0A075B7D0 117 aa10.62□□□□□ -0.71
USP44-203ENST00000537435 HOXA3O43365 443 aaPredicted RBP10.62□□□□□ -0.71
USP44-203ENST00000537435 M0QY20 66 aa10.61□□□□□ -0.71
USP44-203ENST00000537435 SRSF9Q13242 221 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP44-203ENST00000537435 WFDC2Q14508 124 aa10.61□□□□□ -0.71
USP44-203ENST00000537435 MAPK1IP1LQ8NDC0 245 aa10.61□□□□□ -0.71
USP44-203ENST00000537435 CELSR2Q9HCU4 2923 aa10.61□□□□□ -0.71
USP44-203ENST00000537435 F8W1H4 67 aa10.61□□□□□ -0.71
USP44-203ENST00000537435 DOPEY1Q5JWR5 2465 aa10.6□□□□□ -0.71
USP44-203ENST00000537435 TGFAP01135 160 aa10.6□□□□□ -0.71
USP44-203ENST00000537435 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
USP44-203ENST00000537435 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
USP44-203ENST00000537435 A6NJY4 79 aa10.59□□□□□ -0.71
USP44-203ENST00000537435 ZNF876PQ49A33 203 aa10.59□□□□□ -0.71
USP44-203ENST00000537435 ZNRF2Q8NHG8 242 aa10.59□□□□□ -0.71
USP44-203ENST00000537435 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
USP44-203ENST00000537435 A0A096LNT2 108 aa10.59□□□□□ -0.71
USP44-203ENST00000537435 HOXD3P31249 432 aaPredicted RBP10.59□□□□□ -0.71
USP44-203ENST00000537435 CFAP46Q8IYW2 2715 aa10.58□□□□□ -0.72
USP44-203ENST00000537435 A0A0J9YY99 117 aa10.58□□□□□ -0.72
USP44-203ENST00000537435 TSPEAR-AS2P59090 65 aa10.58□□□□□ -0.72
USP44-203ENST00000537435 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
USP44-203ENST00000537435 ELANEP08246 267 aa10.58□□□□□ -0.72
USP44-203ENST00000537435 NSUN5P1Q3KNT7 163 aa10.58□□□□□ -0.72
USP44-203ENST00000537435 MTURNQ8N3F0 131 aa10.58□□□□□ -0.72
USP44-203ENST00000537435 OPRPNQ99935 248 aaPredicted RBP10.58□□□□□ -0.72
USP44-203ENST00000537435 SPANXB1Q9NS25 103 aaPredicted RBP10.58□□□□□ -0.72
USP44-203ENST00000537435 MRPL16Q9NX20 251 aaKnown RBP10.58□□□□□ -0.72
USP44-203ENST00000537435 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
USP44-203ENST00000537435 J3QLI3 93 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 UBE2D1P51668 147 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 RHOHQ15669 191 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 P0DMU3 169 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 FAM231AP0DMU4 169 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 FAM231CP0DMU5 169 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 GAGE13Q4V321 117 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 ZNF702PQ9H963 129 aa10.57□□□□□ -0.72
USP44-203ENST00000537435 USP9XQ93008 2570 aaPredicted RBP10.57□□□□□ -0.72
USP44-203ENST00000537435 DOPEY2Q9Y3R5 2298 aa10.56□□□□□ -0.72
USP44-203ENST00000537435 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
USP44-203ENST00000537435 CSMD2Q7Z408 3487 aa10.56□□□□□ -0.72
USP44-203ENST00000537435 TRGV11A0A075B6L2 103 aa10.56□□□□□ -0.72
USP44-203ENST00000537435 ETDBQ3ZM63 59 aa10.56□□□□□ -0.72
USP44-203ENST00000537435 UBE2E2Q96LR5 201 aa10.56□□□□□ -0.72
USP44-203ENST00000537435 PRO0461Q9UI25 63 aa10.56□□□□□ -0.72
USP44-203ENST00000537435 CRYBG3Q68DQ2 2970 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 APOMO95445 188 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 RBMY1A1P0DJD3 496 aaKnown RBP10.55□□□□□ -0.72
USP44-203ENST00000537435 RBMY1CP0DJD4 496 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 RBMY1FQ15415 496 aaKnown RBP10.55□□□□□ -0.72
USP44-203ENST00000537435 TCTEX1D4Q5JR98 221 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 SORL1Q92673 2214 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 I3L3M4 83 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 Q6YL49 198 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
USP44-203ENST00000537435 J3QQQ9 107 aa10.54□□□□□ -0.72
USP44-203ENST00000537435 TSPAN13O95857 204 aa10.54□□□□□ -0.72
USP44-203ENST00000537435 HTN1P15515 57 aa10.54□□□□□ -0.72
USP44-203ENST00000537435 NFE4Q86UQ8 179 aa10.54□□□□□ -0.72
USP44-203ENST00000537435 RNF152Q8N8N0 203 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms