RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 FN1P02751 2386 aaKnown RBP16.65■□□□□ 0.26
HMGA2-206ENST00000536545 CBY3A6NI87 242 aa16.65■□□□□ 0.26
HMGA2-206ENST00000536545 SMIM17P0DL12 118 aa16.65■□□□□ 0.26
HMGA2-206ENST00000536545 ZNF705AQ6ZN79 300 aaPredicted RBP16.65■□□□□ 0.26
HMGA2-206ENST00000536545 H0Y8G0 127 aa16.64■□□□□ 0.25
HMGA2-206ENST00000536545 IGLV1-51P01701 117 aa16.64■□□□□ 0.25
HMGA2-206ENST00000536545 SUMO2P61956 95 aaKnown RBP16.64■□□□□ 0.25
HMGA2-206ENST00000536545 MCRIP2Q9BUT9 160 aaKnown RBP16.64■□□□□ 0.25
HMGA2-206ENST00000536545 OR11H12B2RN74 326 aa16.64■□□□□ 0.25
HMGA2-206ENST00000536545 A0A087WWL8 130 aa16.63■□□□□ 0.25
HMGA2-206ENST00000536545 IFI27L1Q96BM0 104 aa16.63■□□□□ 0.25
HMGA2-206ENST00000536545 LINC00467Q9BRT7 94 aa16.63■□□□□ 0.25
HMGA2-206ENST00000536545 PPP1R17O96001 155 aa16.62■□□□□ 0.25
HMGA2-206ENST00000536545 INSP01308 110 aa16.62■□□□□ 0.25
HMGA2-206ENST00000536545 LAGE3Q14657 143 aa16.62■□□□□ 0.25
HMGA2-206ENST00000536545 SUMO4Q6EEV6 95 aa16.62■□□□□ 0.25
HMGA2-206ENST00000536545 TRPT1Q86TN4 253 aaKnown RBP16.62■□□□□ 0.25
HMGA2-206ENST00000536545 TMEM158Q8WZ71 300 aa16.62■□□□□ 0.25
HMGA2-206ENST00000536545 IGLC3P0DOY3 106 aa16.61■□□□□ 0.25
HMGA2-206ENST00000536545 NIPBLQ6KC79 2804 aaeCLIP16.61■□□□□ 0.25
HMGA2-206ENST00000536545 C2CD3Q4AC94 2353 aa16.61■□□□□ 0.25
HMGA2-206ENST00000536545 TCAPO15273 167 aa16.61■□□□□ 0.25
HMGA2-206ENST00000536545 IGLL1P15814 213 aa16.61■□□□□ 0.25
HMGA2-206ENST00000536545 STHQ8IWL8 128 aa16.6■□□□□ 0.25
HMGA2-206ENST00000536545 PMCHL2Q9BQD1 86 aa16.6■□□□□ 0.25
HMGA2-206ENST00000536545 CRLF1O75462 422 aa16.59■□□□□ 0.25
HMGA2-206ENST00000536545 CRYGDP07320 174 aa16.59■□□□□ 0.25
HMGA2-206ENST00000536545 LGALS9BQ3B8N2 356 aa16.59■□□□□ 0.25
HMGA2-206ENST00000536545 LGALS9CQ6DKI2 356 aa16.59■□□□□ 0.25
HMGA2-206ENST00000536545 RPL32P62910 135 aaKnown RBP16.59■□□□□ 0.25
HMGA2-206ENST00000536545 CMC4P56277 68 aaPredicted RBP16.58■□□□□ 0.24
HMGA2-206ENST00000536545 BEAN1Q3B7T3 259 aa16.58■□□□□ 0.24
HMGA2-206ENST00000536545 ZNF876PQ49A33 203 aa16.58■□□□□ 0.24
HMGA2-206ENST00000536545 FAM110AQ9BQ89 295 aa16.58■□□□□ 0.24
HMGA2-206ENST00000536545 UQCR10Q9UDW1 63 aa16.58■□□□□ 0.24
HMGA2-206ENST00000536545 hDV102S1A0JD36 115 aa16.57■□□□□ 0.24
HMGA2-206ENST00000536545 K7EMI3 77 aa16.57■□□□□ 0.24
HMGA2-206ENST00000536545 FAM74A4Q5TZK3 123 aa16.57■□□□□ 0.24
HMGA2-206ENST00000536545 C18orf15Q96N68 181 aa16.57■□□□□ 0.24
HMGA2-206ENST00000536545 ST20Q9HBF5 79 aa16.57■□□□□ 0.24
HMGA2-206ENST00000536545 HTN1P15515 57 aa16.56■□□□□ 0.24
HMGA2-206ENST00000536545 ZNF415Q09FC8 603 aa16.56■□□□□ 0.24
HMGA2-206ENST00000536545 LINC00482Q8N8I6 264 aa16.56■□□□□ 0.24
HMGA2-206ENST00000536545 PRM2P04554 102 aa16.56■□□□□ 0.24
HMGA2-206ENST00000536545 ORMDL2Q53FV1 153 aa16.56■□□□□ 0.24
HMGA2-206ENST00000536545 C11orf72Q8NBR9 251 aa16.55■□□□□ 0.24
HMGA2-206ENST00000536545 PTH2Q96A98 100 aa16.55■□□□□ 0.24
HMGA2-206ENST00000536545 LINC01587Q99440 93 aa16.55■□□□□ 0.24
HMGA2-206ENST00000536545 CSTL1Q9H114 145 aa16.55■□□□□ 0.24
HMGA2-206ENST00000536545 C19orf73Q9NVV2 129 aa16.55■□□□□ 0.24
HMGA2-206ENST00000536545 GOLT1BQ9Y3E0 138 aa16.55■□□□□ 0.24
HMGA2-206ENST00000536545 F5H697 171 aa16.54■□□□□ 0.24
HMGA2-206ENST00000536545 XCL2Q9UBD3 114 aa16.54■□□□□ 0.24
HMGA2-206ENST00000536545 TRBV6-5A0A0K0K1A5 114 aa16.54■□□□□ 0.24
HMGA2-206ENST00000536545 NUDT3O95989 172 aa16.54■□□□□ 0.24
HMGA2-206ENST00000536545 PF4P02776 101 aa16.54■□□□□ 0.24
HMGA2-206ENST00000536545 ZNF56Q15929 161 aa16.54■□□□□ 0.24
HMGA2-206ENST00000536545 PIK3CD-AS1Q5SR53 167 aa16.54■□□□□ 0.24
HMGA2-206ENST00000536545 HSBP1L1C9JCN9 74 aa16.53■□□□□ 0.24
HMGA2-206ENST00000536545 M0QY20 66 aa16.53■□□□□ 0.24
HMGA2-206ENST00000536545 M0R2P5 195 aa16.53■□□□□ 0.24
HMGA2-206ENST00000536545 EREGO14944 169 aa16.53■□□□□ 0.24
HMGA2-206ENST00000536545 ATP5LO75964 103 aa16.53■□□□□ 0.24
HMGA2-206ENST00000536545 MORN3Q6PF18 240 aaPredicted RBP16.53■□□□□ 0.24
HMGA2-206ENST00000536545 POLR2KP53803 58 aaKnown RBP16.52■□□□□ 0.24
HMGA2-206ENST00000536545 MRPL52Q86TS9 123 aaKnown RBP16.52■□□□□ 0.24
HMGA2-206ENST00000536545 C1orf158Q8N1D5 194 aa16.52■□□□□ 0.24
HMGA2-206ENST00000536545 WFDC10AQ9H1F0 79 aa16.51■□□□□ 0.23
HMGA2-206ENST00000536545 JMJD1CQ15652 2540 aa16.51■□□□□ 0.23
HMGA2-206ENST00000536545 NEGR1Q7Z3B1 354 aa16.51■□□□□ 0.23
HMGA2-206ENST00000536545 TOMM6Q96B49 74 aa16.51■□□□□ 0.23
HMGA2-206ENST00000536545 NUTF2P61970 127 aaKnown RBP16.5■□□□□ 0.23
HMGA2-206ENST00000536545 ODF1Q14990 250 aa16.5■□□□□ 0.23
HMGA2-206ENST00000536545 Q6ZN92 141 aa16.5■□□□□ 0.23
HMGA2-206ENST00000536545 SNHG12Q9BXW3 62 aa16.5■□□□□ 0.23
HMGA2-206ENST00000536545 UFSP1Q6NVU6 142 aa16.49■□□□□ 0.23
HMGA2-206ENST00000536545 EDA2RQ9HAV5 297 aa16.49■□□□□ 0.23
HMGA2-206ENST00000536545 SPXQ9BT56 116 aa16.49■□□□□ 0.23
HMGA2-206ENST00000536545 DKK2Q9UBU2 259 aa16.49■□□□□ 0.23
HMGA2-206ENST00000536545 TRBV27A0A0K0K1C4 114 aa16.48■□□□□ 0.23
HMGA2-206ENST00000536545 SDHAF1A6NFY7 115 aa16.48■□□□□ 0.23
HMGA2-206ENST00000536545 A8MWV9 139 aa16.48■□□□□ 0.23
HMGA2-206ENST00000536545 GIG44P09565 113 aaPredicted RBP16.48■□□□□ 0.23
HMGA2-206ENST00000536545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.48■□□□□ 0.23
HMGA2-206ENST00000536545 IL17DQ8TAD2 202 aa16.48■□□□□ 0.23
HMGA2-206ENST00000536545 M0R143 59 aa16.47■□□□□ 0.23
HMGA2-206ENST00000536545 VCYO14598 125 aa16.47■□□□□ 0.23
HMGA2-206ENST00000536545 HNRNPA3P51991 378 aaKnown RBP16.47■□□□□ 0.23
HMGA2-206ENST00000536545 LBHQ53QV2 105 aaPredicted RBP16.47■□□□□ 0.23
HMGA2-206ENST00000536545 C2orf88Q9BSF0 95 aa16.47■□□□□ 0.23
HMGA2-206ENST00000536545 TMEM208Q9BTX3 173 aa16.47■□□□□ 0.23
HMGA2-206ENST00000536545 ZMAT4Q9H898 229 aa16.47■□□□□ 0.23
HMGA2-206ENST00000536545 PRSS1P07477 247 aa16.46■□□□□ 0.23
HMGA2-206ENST00000536545 AZU1P20160 251 aa16.46■□□□□ 0.22
HMGA2-206ENST00000536545 C2orf66Q6UXQ4 117 aa16.46■□□□□ 0.22
HMGA2-206ENST00000536545 ZFP2Q6ZN57 461 aa16.44■□□□□ 0.22
HMGA2-206ENST00000536545 MRPL16Q9NX20 251 aaKnown RBP16.44■□□□□ 0.22
HMGA2-206ENST00000536545 TP73-AS1Q9UF72 201 aa16.44■□□□□ 0.22
HMGA2-206ENST00000536545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.43■□□□□ 0.22
HMGA2-206ENST00000536545 ANKRD39Q53RE8 183 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms