RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 UBE2E2Q96LR5 201 aa9.88□□□□□ -0.83
PTPN21-202ENST00000536337 SIGMAR1Q99720 223 aa9.88□□□□□ -0.83
PTPN21-202ENST00000536337 COL12A1Q99715 3063 aa9.88□□□□□ -0.83
PTPN21-202ENST00000536337 C16orf54Q6UWD8 224 aa9.88□□□□□ -0.83
PTPN21-202ENST00000536337 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
PTPN21-202ENST00000536337 IGHV3-53P01767 116 aa9.87□□□□□ -0.83
PTPN21-202ENST00000536337 C20orf173Q96LM9 149 aa9.87□□□□□ -0.83
PTPN21-202ENST00000536337 TSSC4Q9Y5U2 329 aaPredicted RBP9.87□□□□□ -0.83
PTPN21-202ENST00000536337 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
PTPN21-202ENST00000536337 FGF6P10767 208 aa9.87□□□□□ -0.83
PTPN21-202ENST00000536337 IGHV3-38A0A0C4DH36 116 aa9.86□□□□□ -0.83
PTPN21-202ENST00000536337 SIVA1O15304 175 aa9.86□□□□□ -0.83
PTPN21-202ENST00000536337 RBX1P62877 108 aa9.86□□□□□ -0.83
PTPN21-202ENST00000536337 PAPPA-AS1Q5QFB9 102 aa9.86□□□□□ -0.83
PTPN21-202ENST00000536337 NDUFS8O00217 210 aa9.86□□□□□ -0.83
PTPN21-202ENST00000536337 MAPKAPK5-AS1Q8N8E1 139 aa9.86□□□□□ -0.83
PTPN21-202ENST00000536337 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
PTPN21-202ENST00000536337 A0A096LNJ9 63 aa9.86□□□□□ -0.83
PTPN21-202ENST00000536337 ANKRD17O75179 2603 aaKnown RBP9.85□□□□□ -0.83
PTPN21-202ENST00000536337 DEFB112Q30KQ8 113 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 C9orf47Q6ZRZ4 202 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 Q6ZS46 218 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 ZNF48Q96MX3 618 aaPredicted RBP9.85□□□□□ -0.83
PTPN21-202ENST00000536337 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
PTPN21-202ENST00000536337 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 PRR9Q5T870 116 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 HIST2H2BDQ6DRA6 164 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 GATD1Q8NB37 220 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 TRAV8-2A0A0B4J237 113 aa9.85□□□□□ -0.83
PTPN21-202ENST00000536337 PMVKQ15126 192 aa9.84□□□□□ -0.83
PTPN21-202ENST00000536337 C10orf99Q6UWK7 81 aa9.84□□□□□ -0.83
PTPN21-202ENST00000536337 IGLL5B9A064 214 aa9.84□□□□□ -0.83
PTPN21-202ENST00000536337 COX6CP09669 75 aa9.84□□□□□ -0.83
PTPN21-202ENST00000536337 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
PTPN21-202ENST00000536337 C11orf71Q6IPW1 123 aa9.84□□□□□ -0.83
PTPN21-202ENST00000536337 TCTEX1D4Q5JR98 221 aa9.83□□□□□ -0.84
PTPN21-202ENST00000536337 TOMM7Q9P0U1 55 aa9.83□□□□□ -0.84
PTPN21-202ENST00000536337 DLX4Q92988 240 aaPredicted RBP9.83□□□□□ -0.84
PTPN21-202ENST00000536337 MDFICQ9P1T7 246 aa9.83□□□□□ -0.84
PTPN21-202ENST00000536337 XCL2Q9UBD3 114 aa9.83□□□□□ -0.84
PTPN21-202ENST00000536337 SUMO4Q6EEV6 95 aa9.82□□□□□ -0.84
PTPN21-202ENST00000536337 Q8N6K4 173 aa9.82□□□□□ -0.84
PTPN21-202ENST00000536337 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
PTPN21-202ENST00000536337 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
PTPN21-202ENST00000536337 IGHV1OR15-1A0A075B7D0 117 aa9.82□□□□□ -0.84
PTPN21-202ENST00000536337 EBI3Q14213 229 aa9.82□□□□□ -0.84
PTPN21-202ENST00000536337 CLPSL1A2RUU4 121 aa9.82□□□□□ -0.84
PTPN21-202ENST00000536337 RASL10AQ92737 203 aa9.81□□□□□ -0.84
PTPN21-202ENST00000536337 U3KQK5 164 aa9.81□□□□□ -0.84
PTPN21-202ENST00000536337 A8MWV9 139 aa9.81□□□□□ -0.84
PTPN21-202ENST00000536337 BAALCQ8WXS3 180 aa9.81□□□□□ -0.84
PTPN21-202ENST00000536337 DOPEY1Q5JWR5 2465 aa9.81□□□□□ -0.84
PTPN21-202ENST00000536337 PRB1P04280 392 aa9.81□□□□□ -0.84
PTPN21-202ENST00000536337 RRN3P1Q2M238 152 aa9.81□□□□□ -0.84
PTPN21-202ENST00000536337 C9JAW5 83 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 EDN2P20800 178 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 C11orf86A6NJI1 115 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 IGHG4P01861 327 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 ZFP2Q6ZN57 461 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 Q8N1Y9 231 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 MRPL53Q96EL3 112 aaKnown RBP9.8□□□□□ -0.84
PTPN21-202ENST00000536337 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
PTPN21-202ENST00000536337 J3QQQ9 107 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 UBE2L6O14933 153 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 ZFAND2AQ8N6M9 145 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 LENEPQ9Y5L5 61 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 TRGV2A0A075B6R0 118 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 AZU1P20160 251 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
PTPN21-202ENST00000536337 C19orf54Q5BKX5 351 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 FOXI2Q6ZQN5 318 aa9.79□□□□□ -0.84
PTPN21-202ENST00000536337 STHQ8IWL8 128 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 C10orf105Q8TEF2 133 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 HOXD3P31249 432 aaPredicted RBP9.78□□□□□ -0.84
PTPN21-202ENST00000536337 PTH2Q96A98 100 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 IGHG2P01859 326 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 PRM2P04554 102 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 TRPT1Q86TN4 253 aaKnown RBP9.78□□□□□ -0.84
PTPN21-202ENST00000536337 APRG1Q8IVJ8 170 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 LINC01356Q8N9X3 169 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 TIMM21Q9BVV7 248 aa9.78□□□□□ -0.84
PTPN21-202ENST00000536337 ASH1LQ9NR48 2969 aaKnown RBP9.78□□□□□ -0.84
PTPN21-202ENST00000536337 F8W1H4 67 aa9.77□□□□□ -0.84
PTPN21-202ENST00000536337 HHLA3Q9XRX5 114 aa9.77□□□□□ -0.84
PTPN21-202ENST00000536337 SLURP1P55000 103 aa9.77□□□□□ -0.85
PTPN21-202ENST00000536337 CFHR3Q02985 330 aa9.77□□□□□ -0.85
PTPN21-202ENST00000536337 CEMP1Q6PRD7 247 aaPredicted RBP9.77□□□□□ -0.85
PTPN21-202ENST00000536337 NRACQ8N912 160 aa9.77□□□□□ -0.85
PTPN21-202ENST00000536337 RELNP78509 3460 aa9.77□□□□□ -0.85
PTPN21-202ENST00000536337 A0A1B0GV72 72 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 PLEKHB2Q96CS7 222 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 I3L3M4 83 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 LGALS1P09382 135 aaKnown RBP9.76□□□□□ -0.85
PTPN21-202ENST00000536337 P0DMU3 169 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 FAM231AP0DMU4 169 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms