RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 ATP5J2P56134 94 aa13.93□□□□□ -0.18
CHPF-203ENST00000535926 RPL32P62910 135 aaKnown RBP13.93□□□□□ -0.18
CHPF-203ENST00000535926 SCGB1D4Q6XE38 83 aa13.93□□□□□ -0.18
CHPF-203ENST00000535926 MDFICQ9P1T7 246 aa13.93□□□□□ -0.18
CHPF-203ENST00000535926 CFAP46Q8IYW2 2715 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 TRAV12-2A0A075B6T6 113 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 IGKV3-20P01619 116 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 ID1P41134 155 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 ETDBQ3ZM63 59 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 CLEC2AQ6UVW9 174 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 PRO0461Q9UI25 63 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 SDHAF1A6NFY7 115 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 VCYO14598 125 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 ZNF688P0C7X2 276 aa13.92□□□□□ -0.18
CHPF-203ENST00000535926 FAM74A4Q5TZK3 123 aa13.91□□□□□ -0.18
CHPF-203ENST00000535926 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
CHPF-203ENST00000535926 PSMB8P28062 276 aa13.9□□□□□ -0.18
CHPF-203ENST00000535926 SRSF9Q13242 221 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHPF-203ENST00000535926 PMVKQ15126 192 aa13.9□□□□□ -0.18
CHPF-203ENST00000535926 GAGE13Q4V321 117 aa13.9□□□□□ -0.18
CHPF-203ENST00000535926 NDUFS8O00217 210 aa13.9□□□□□ -0.18
CHPF-203ENST00000535926 ZNRF2Q8NHG8 242 aa13.9□□□□□ -0.18
CHPF-203ENST00000535926 KIR2DL4Q99706 377 aa13.9□□□□□ -0.18
CHPF-203ENST00000535926 FLNCQ14315 2725 aa13.89□□□□□ -0.19
CHPF-203ENST00000535926 IGHV3-16A0A0C4DH30 117 aa13.89□□□□□ -0.19
CHPF-203ENST00000535926 TMEM238C9JI98 176 aa13.89□□□□□ -0.19
CHPF-203ENST00000535926 LINC01549A6NIU2 74 aa13.89□□□□□ -0.19
CHPF-203ENST00000535926 TSPEAR-AS2P59090 65 aa13.89□□□□□ -0.19
CHPF-203ENST00000535926 TRBV27A0A0K0K1C4 114 aa13.88□□□□□ -0.19
CHPF-203ENST00000535926 LGALS9O00182 355 aa13.88□□□□□ -0.19
CHPF-203ENST00000535926 UBE2D1P51668 147 aa13.88□□□□□ -0.19
CHPF-203ENST00000535926 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
CHPF-203ENST00000535926 ZNF256Q9Y2P7 627 aaPredicted RBP13.88□□□□□ -0.19
CHPF-203ENST00000535926 SFTA2Q6UW10 78 aa13.88□□□□□ -0.19
CHPF-203ENST00000535926 Q8N1Y9 231 aa13.88□□□□□ -0.19
CHPF-203ENST00000535926 SPAG8Q99932 426 aaPredicted RBP13.88□□□□□ -0.19
CHPF-203ENST00000535926 MRPL16Q9NX20 251 aaKnown RBP13.88□□□□□ -0.19
CHPF-203ENST00000535926 A0A0J9YY99 117 aa13.87□□□□□ -0.19
CHPF-203ENST00000535926 IGHV4-59P01825 116 aa13.87□□□□□ -0.19
CHPF-203ENST00000535926 OPRPNQ99935 248 aaPredicted RBP13.87□□□□□ -0.19
CHPF-203ENST00000535926 UTP20O75691 2785 aaKnown RBP13.87□□□□□ -0.19
CHPF-203ENST00000535926 A0A0J9YX75 114 aa13.87□□□□□ -0.19
CHPF-203ENST00000535926 TMEM141Q96I45 108 aa13.87□□□□□ -0.19
CHPF-203ENST00000535926 TIMM17AQ99595 171 aa13.87□□□□□ -0.19
CHPF-203ENST00000535926 SORL1Q92673 2214 aa13.86□□□□□ -0.19
CHPF-203ENST00000535926 M0QY20 66 aa13.86□□□□□ -0.19
CHPF-203ENST00000535926 INSL3P51460 131 aa13.86□□□□□ -0.19
CHPF-203ENST00000535926 TSSC4Q9Y5U2 329 aaPredicted RBP13.86□□□□□ -0.19
CHPF-203ENST00000535926 TRBV6-5A0A0K0K1A5 114 aa13.86□□□□□ -0.19
CHPF-203ENST00000535926 ZNF876PQ49A33 203 aa13.86□□□□□ -0.19
CHPF-203ENST00000535926 TMEM170BQ5T4T1 132 aa13.86□□□□□ -0.19
CHPF-203ENST00000535926 PKD1L2Q7Z442 2459 aa13.86□□□□□ -0.19
CHPF-203ENST00000535926 PAPPA-AS1Q5QFB9 102 aa13.85□□□□□ -0.19
CHPF-203ENST00000535926 ZNF580Q9UK33 172 aa13.85□□□□□ -0.19
CHPF-203ENST00000535926 SPINK13Q1W4C9 94 aa13.85□□□□□ -0.19
CHPF-203ENST00000535926 NRGNQ92686 78 aa13.85□□□□□ -0.19
CHPF-203ENST00000535926 TSPAN13O95857 204 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 DEFB112Q30KQ8 113 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 GTSF1LQ9H1H1 148 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 TMEM238LA0A1B0GVL6 79 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 A6NJY4 79 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 APOMO95445 188 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 HERVK_113P61574 105 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 ZNF56Q15929 161 aa13.84□□□□□ -0.19
CHPF-203ENST00000535926 ZANQ9Y493 2812 aa13.83□□□□□ -0.19
CHPF-203ENST00000535926 B4DSR2 109 aa13.83□□□□□ -0.19
CHPF-203ENST00000535926 P0DMU3 169 aa13.83□□□□□ -0.19
CHPF-203ENST00000535926 FAM231AP0DMU4 169 aa13.83□□□□□ -0.19
CHPF-203ENST00000535926 FAM231CP0DMU5 169 aa13.83□□□□□ -0.19
CHPF-203ENST00000535926 SAMD13Q5VXD3 122 aa13.83□□□□□ -0.19
CHPF-203ENST00000535926 AMELXQ99217 191 aa13.83□□□□□ -0.19
CHPF-203ENST00000535926 USP9XQ93008 2570 aaPredicted RBP13.83□□□□□ -0.2
CHPF-203ENST00000535926 DOPEY2Q9Y3R5 2298 aa13.83□□□□□ -0.2
CHPF-203ENST00000535926 GAGE12HA6NDE8 117 aa13.83□□□□□ -0.2
CHPF-203ENST00000535926 K7EQG2 157 aa13.83□□□□□ -0.2
CHPF-203ENST00000535926 DUX5Q96PT3 197 aa13.83□□□□□ -0.2
CHPF-203ENST00000535926 AZU1P20160 251 aa13.82□□□□□ -0.2
CHPF-203ENST00000535926 SMCPP49901 116 aaPredicted RBP13.82□□□□□ -0.2
CHPF-203ENST00000535926 ODF3Q96PU9 254 aa13.82□□□□□ -0.2
CHPF-203ENST00000535926 SYNJ2BPP57105 145 aa13.82□□□□□ -0.2
CHPF-203ENST00000535926 SNRPD3P62318 126 aaKnown RBP13.82□□□□□ -0.2
CHPF-203ENST00000535926 IGHV1OR15-1A0A075B7D0 117 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 IGHV3-30P01768 117 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 IGHV3-30-5P0DP03 117 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 NDUFA11Q86Y39 141 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 CREBBPQ92793 2442 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 USP9YO00507 2555 aaPredicted RBP13.81□□□□□ -0.2
CHPF-203ENST00000535926 LOC107984156A0A0G2JMH3 177 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 ARL17AQ8IVW1 177 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 SLC25A29Q8N8R3 303 aa13.81□□□□□ -0.2
CHPF-203ENST00000535926 CFAP126Q5VTH2 177 aa13.8□□□□□ -0.2
CHPF-203ENST00000535926 SIGMAR1Q99720 223 aa13.8□□□□□ -0.2
CHPF-203ENST00000535926 SYT8Q8NBV8 401 aa13.8□□□□□ -0.2
CHPF-203ENST00000535926 DOPEY1Q5JWR5 2465 aa13.79□□□□□ -0.2
CHPF-203ENST00000535926 J3QQQ9 107 aa13.79□□□□□ -0.2
CHPF-203ENST00000535926 CFC1BP0CG36 223 aa13.79□□□□□ -0.2
CHPF-203ENST00000535926 CFC1P0CG37 223 aa13.79□□□□□ -0.2
CHPF-203ENST00000535926 PSMB2P49721 201 aa13.79□□□□□ -0.2
CHPF-203ENST00000535926 UBE2D3P61077 147 aa13.79□□□□□ -0.2
CHPF-203ENST00000535926 UBE2D2P62837 147 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms