RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 P0DMU3 169 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 FAM231AP0DMU4 169 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 FAM231CP0DMU5 169 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 IGHV4-30-4P0DP06 118 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 RPL13AP40429 203 aaKnown RBP5.01□□□□□ -1.61
USP28-202ENST00000535607 INSL3P51460 131 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 FAM201AQ5SY85 155 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 UTF1Q5T230 341 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 HIST2H2BCQ6DN03 193 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 HIST2H2BDQ6DRA6 164 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 C10orf126Q8N4M7 172 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 C17orf77Q96MU5 243 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 CITED1Q99966 193 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 PRADC1Q9BSG0 188 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 SS18L2Q9UHA2 77 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 LENEPQ9Y5L5 61 aa5.01□□□□□ -1.61
USP28-202ENST00000535607 MYO18BQ8IUG5 2567 aa5□□□□□ -1.61
USP28-202ENST00000535607 COL12A1Q99715 3063 aa5□□□□□ -1.61
USP28-202ENST00000535607 TRBV7-9A0A0J9YWB2 115 aa5□□□□□ -1.61
USP28-202ENST00000535607 BUB1B-PAK6H3BSN5 160 aa5□□□□□ -1.61
USP28-202ENST00000535607 K7EIM0 57 aa5□□□□□ -1.61
USP28-202ENST00000535607 NBR2O15453 112 aa5□□□□□ -1.61
USP28-202ENST00000535607 SLC25A20O43772 301 aa5□□□□□ -1.61
USP28-202ENST00000535607 LGALS3P17931 250 aaKnown RBP5□□□□□ -1.61
USP28-202ENST00000535607 DLX6P56179 175 aa5□□□□□ -1.61
USP28-202ENST00000535607 ERCC8Q13216 396 aa5□□□□□ -1.61
USP28-202ENST00000535607 HES1Q14469 280 aa5□□□□□ -1.61
USP28-202ENST00000535607 ZNF672Q499Z4 452 aaPredicted RBP5□□□□□ -1.61
USP28-202ENST00000535607 NFE4Q86UQ8 179 aa5□□□□□ -1.61
USP28-202ENST00000535607 NDUFA11Q86Y39 141 aa5□□□□□ -1.61
USP28-202ENST00000535607 NEXN-AS1Q8NBZ9 246 aa5□□□□□ -1.61
USP28-202ENST00000535607 LINC01600Q96MT4 127 aa5□□□□□ -1.61
USP28-202ENST00000535607 TTTY13Q9BZ97 58 aa5□□□□□ -1.61
USP28-202ENST00000535607 C21orf62Q9NYP8 219 aa5□□□□□ -1.61
USP28-202ENST00000535607 PRR14LQ5THK1 2151 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 NBASA2RRP1 2371 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 A0A0B4J2C4 111 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 J3QKU1 62 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 ACYP1P07311 99 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 VPREB1P12018 145 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 DLX1P56177 255 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 RPL32P62910 135 aaKnown RBP4.99□□□□□ -1.61
USP28-202ENST00000535607 BSPH1Q075Z2 132 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 MRGPRG-AS1Q2M3A8 158 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 DUX4L9Q6RFH8 374 aaPredicted RBP4.99□□□□□ -1.61
USP28-202ENST00000535607 ANKRD29Q8N6D5 301 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 DPH3P1Q9H4G8 78 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 ZNRD1Q9P1U0 126 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 ONECUT1Q9UBC0 465 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 DSCAMO60469 2012 aa4.99□□□□□ -1.61
USP28-202ENST00000535607 HEATR1Q9H583 2144 aaKnown RBP4.99□□□□□ -1.61
USP28-202ENST00000535607 FLNCQ14315 2725 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 IGLV5-52A0A0A0MRZ9 124 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 TRAV2A0A0B4J234 112 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 C11orf86A6NJI1 115 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 C9JAW5 83 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 H3BMM0 161 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 TCL1BO95988 128 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 IGLV1-47P01700 117 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 ATP5G1P05496 136 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 CD7P09564 240 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 APELAP0DMC3 54 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 PLA2G2AP14555 144 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 LOXP28300 417 aaPredicted RBP4.98□□□□□ -1.61
USP28-202ENST00000535607 CCL8P80075 99 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 PMVKQ15126 192 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 Q1RN00 199 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 SPRNQ5BIV9 151 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 C2orf66Q6UXQ4 117 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 SLC25A29Q8N8R3 303 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 NPBQ8NG41 125 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 BAALCQ8WXS3 180 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 UBE2WQ96B02 151 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 PLEKHB2Q96CS7 222 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 IMUPQ9GZP8 106 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 DYNLRB1Q9NP97 96 aa4.98□□□□□ -1.61
USP28-202ENST00000535607 IGLV11-55A0A075B6I3 123 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 IGHV3-72A0A0B4J1Y9 119 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 TRBV10-2A0A0K0K1G8 114 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 OOSP1A8MZH6 123 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 H3BT86 120 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 M0R2P5 195 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 CFC1BP0CG36 223 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 CFC1P0CG37 223 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 S100A4P26447 101 aaKnown RBP4.97□□□□□ -1.61
USP28-202ENST00000535607 ZNF80P51504 273 aaPredicted RBP4.97□□□□□ -1.61
USP28-202ENST00000535607 DIAPH2-AS1Q14236 149 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 TMEM170BQ5T4T1 132 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 ZFP2Q6ZN57 461 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 Q71RC1 249 aaPredicted RBP4.97□□□□□ -1.61
USP28-202ENST00000535607 Q8TAT8 98 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 CCL17Q92583 94 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 TMEM101Q96IK0 257 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 KIR2DL4Q99706 377 aa4.97□□□□□ -1.61
USP28-202ENST00000535607 USP9XQ93008 2570 aaPredicted RBP4.97□□□□□ -1.61
USP28-202ENST00000535607 TNCP24821 2201 aa4.96□□□□□ -1.62
USP28-202ENST00000535607 TRAV21A0A0B4J279 112 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms