RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SNRPD3P62318 126 aaKnown RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BCP62807 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF90Q03938 601 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 CATR1Q13166 79 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 MSMO1Q15800 293 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST2H2BEQ16778 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 SPINK13Q1W4C9 94 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM241Q24JQ0 296 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 BSXQ3C1V8 233 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 ACOT6Q3I5F7 207 aaPredicted RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 PYY3Q5JQD4 70 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 LYPD5Q6UWN5 251 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 AMTNQ6UX39 209 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 DPPA3Q6W0C5 159 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 Q6ZSA8 131 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 H2BFWTQ7Z2G1 175 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 SH2D6Q7Z4S9 175 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 BAGE3Q86Y29 109 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 BAGE2Q86Y30 109 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM183AQ8IXX5 376 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 STPG4Q8N801 248 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 Q8N814 137 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 OR4X1Q8NH49 305 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 OR4A16Q8NH70 328 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 CMTM2Q8TAZ6 248 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 CIRBP-AS1Q8TBR5 109 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BHQ93079 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 LSM10Q969L4 123 aaKnown RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 C14orf144Q96I85 54 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 ATP6V0BQ99437 205 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 LINC01587Q99440 93 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HSD17B10Q99714 261 aaKnown RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 TXN2Q99757 166 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BNQ99877 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BMQ99879 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 VAMP8Q9BV40 100 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM147Q9BVK8 224 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 ARV1Q9H2C2 271 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 NRN1Q9NPD7 142 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 MANBALQ9NQG1 85 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 FKBP11Q9NYL4 201 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 NAGKQ9UJ70 344 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 A0A087WWC5 75 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 PIGBOS1A0A0B4J2F0 54 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 A0A0J9YX75 114 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 H0Y8G0 127 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 CTXN2P0C2S0 81 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 NTF3P20783 257 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 F2RP25116 425 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 RPL23P62829 140 aaKnown RBP1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 MEF2BQ02080 365 aaPredicted RBP1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF726P1Q15940 193 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 IQCJQ1A5X6 159 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM183BQ1AE95 376 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 KIAA1644Q3SXP7 199 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 RNASEKQ6P5S7 137 aaKnown RBP1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 SIGLEC15Q6ZMC9 328 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 FOXI2Q6ZQN5 318 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 WFDC10BQ8IUB3 73 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 KRTAP7-1Q8IUC3 87 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 OR10P1Q8NGE3 313 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 DTD1Q8TEA8 209 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 BTF3L4Q96K17 158 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 IGF2BP2-AS1Q96M15 143 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 IMMP2LQ96T52 175 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BLQ99880 126 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 WDR61Q9GZS3 305 aaKnown RBP1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 PARLQ9H300 379 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 RPRMQ9NS64 109 aa1.93□□□□□ -2.1
CHMP4A-208ENST00000534106 SNURFLB1AK76 121 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 SMIM1B2RUZ4 78 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 M0R143 59 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 SLC17A3O00476 420 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 SOCS3O14543 225 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 PSCAO43653 123 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 OR7C2O60412 319 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 CIDEAO60543 219 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 TSHBP01222 138 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 IGKV1-39P01597 117 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 IGKV1-5P01602 117 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 IGHV3-53P01767 116 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 IGKV1D-39P04432 117 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 ARL14EPLP0DKL9 152 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 CRISP2P16562 243 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 OR10J1P30954 320 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 CNN1P51911 297 aaKnown RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 LINC01547P58512 204 aaPredicted RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 SPCS3P61009 180 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 RPL37AP61513 92 aaKnown RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 RPL19P84098 196 aaKnown RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 IL15RAQ13261 267 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 POU2AF1Q16633 256 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 SPATA45Q537H7 98 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 NMSQ5H8A3 153 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 GCSAMLQ5JQS6 135 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 MIC13Q5XKP0 118 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 MRPL54Q6P161 138 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms