RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 C9JQL5 133 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 ERC2-IT1O76042 136 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 RLN2P04090 185 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 RPL12P30050 165 aaKnown RBP0.8□□□□□ -2.28
KNL1-211ENST00000533001 RNASE10Q5GAN6 216 aaKnown RBP0.8□□□□□ -2.28
KNL1-211ENST00000533001 IDNKQ5T6J7 187 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 CIB3Q96Q77 187 aaPredicted RBP0.8□□□□□ -2.28
KNL1-211ENST00000533001 COMMD3Q9UBI1 195 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 LINC00959A0A1B0GUT2 108 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 FAM74A7A6NL05 159 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 H3BS24 57 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 TAS2R19P59542 299 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 FAM162BQ5T6X4 162 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 NOTCH2NLQ7Z3S9 236 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 CLRN3Q8NCR9 226 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 ZNF738Q8NE65 137 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 ZFAND1Q8TCF1 268 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 SH3BGRL3Q9H299 93 aa0.8□□□□□ -2.28
KNL1-211ENST00000533001 IGLV5-45A0A087WSX0 123 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 IGHV3-73A0A0B4J1V6 119 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 ATP6V1G2O95670 118 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 IL5P05113 134 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 IL7P13232 177 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 RHOHQ15669 191 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 Q8N9P0 234 aaPredicted RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 THAP6Q8TBB0 222 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 URB1-AS1Q96HZ7 61 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 EXTL2Q9UBQ6 330 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 TRBV24-1A0A075B6N3 115 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 BCL2P10415 239 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 EVI2AP22794 236 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 RNASE4P34096 147 aaKnown RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 SPANXN5Q5MJ07 72 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 UBE2WQ96B02 151 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 S100A13Q99584 98 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 M0R378 163 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 CIDEAO60543 219 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 SRIP30626 198 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 GALR1P47211 349 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 CAMLGP49069 296 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 UNQ6190/PRO20217Q6UXQ8 127 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 PBDC1Q9BVG4 233 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 ARL2-SNX15V9GYD0 113 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 LOC100506127A0A0U1RQW1 187 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 RBFOX3A6NFN3 312 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 SULT1A1P50225 295 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 REG3AQ06141 175 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 FAM229BQ4G0N7 80 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 FAM122CQ6P4D5 195 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 SMIM29Q86T20 159 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 UBE2DNLQ8IWF7 75 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 CMTM1Q8IZ96 169 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 OR2T35Q8NGX2 323 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 SLC25A21Q9BQT8 299 aaPredicted RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 SMDT1Q9H4I9 107 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 HIGD1AQ9Y241 93 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 A0A087WWL8 130 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 GAGE12JA6NER3 117 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 RPS29P62273 56 aaKnown RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 GAGE1Q13065 139 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 GAGE4Q13068 117 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 GAGE5Q13069 117 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 Q5XG85 94 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 C10orf67Q8IYJ2 551 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 RAB24Q969Q5 203 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 RPL39LQ96EH5 51 aaKnown RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 S100A16Q96FQ6 103 aaKnown RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 SEC22CQ9BRL7 303 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 Q9BRP9 147 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 ATG101Q9BSB4 218 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 C6orf62Q9GZU0 229 aaPredicted RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 MRPL35Q9NZE8 188 aaKnown RBP0.79□□□□□ -2.28
KNL1-211ENST00000533001 PSG8Q9UQ74 426 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 UBE2D4Q9Y2X8 147 aa0.79□□□□□ -2.28
KNL1-211ENST00000533001 IGLV4-69A0A075B6H9 119 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 C9JCJ5 164 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 K7EQM0 130 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 VPREB1P12018 145 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 HTN1P15515 57 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 PPT1P50897 306 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 TSPAN14Q8NG11 270 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 PPDPFQ9H3Y8 114 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 COPZ2Q9P299 210 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 TPRKBQ9Y3C4 175 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 TRAV8-4A0A0B4J246 113 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 DPPA5A6NC42 116 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 PGPA6NDG6 321 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 P01737 135 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 CFC1BP0CG36 223 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 RPL11P62913 178 aaKnown RBP0.78□□□□□ -2.28
KNL1-211ENST00000533001 EBLN2Q6P2I7 272 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 OR1L4Q8NGR5 311 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 AMELXQ99217 191 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 A0A087WWC5 75 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 IFNA5P01569 189 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 TALDO1P37837 337 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 KRTAP10-10P60014 251 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 EPDR1Q9UM22 224 aa0.78□□□□□ -2.28
KNL1-211ENST00000533001 TRGV2A0A075B6R0 118 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 TRAV34A0A0B4J273 112 aa0.78□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms