RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 HIGD1BQ9P298 99 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 ZNF256Q9Y2P7 627 aaPredicted RBP11.1□□□□□ -0.63
SSH3-210ENST00000532881 TGFAP01135 160 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 DEFB136Q30KP8 78 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 TP53TG1Q9Y2A0 90 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 B4DSR2 109 aa11.09□□□□□ -0.63
SSH3-210ENST00000532881 FABP2P12104 132 aa11.09□□□□□ -0.63
SSH3-210ENST00000532881 SONP18583 2426 aaKnown RBP11.09□□□□□ -0.63
SSH3-210ENST00000532881 PLNP26678 52 aa11.09□□□□□ -0.63
SSH3-210ENST00000532881 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
SSH3-210ENST00000532881 C20orf78Q9BR46 151 aa11.09□□□□□ -0.63
SSH3-210ENST00000532881 APRG1Q8IVJ8 170 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 H3BUA1 57 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 NDUFS8O00217 210 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 Q8N1Y9 231 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 OR11H1Q8NG94 326 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 OR11H2Q8NH07 326 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 TM2D2Q9BX73 214 aa11.08□□□□□ -0.64
SSH3-210ENST00000532881 CHD6Q8TD26 2715 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 IGHV3-73A0A0B4J1V6 119 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 SLC25A16P16260 332 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 BEX4Q9NWD9 120 aaPredicted RBP11.07□□□□□ -0.64
SSH3-210ENST00000532881 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
SSH3-210ENST00000532881 IGHV4OR15-8A0A075B7B6 117 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 A0A087WW49 117 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 C11orf86A6NJI1 115 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 LGALS1P09382 135 aaKnown RBP11.07□□□□□ -0.64
SSH3-210ENST00000532881 C12orf74Q32Q52 190 aa11.07□□□□□ -0.64
SSH3-210ENST00000532881 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
SSH3-210ENST00000532881 ZFP2Q6ZN57 461 aa11.06□□□□□ -0.64
SSH3-210ENST00000532881 TRAV12-1A0A0B4J245 112 aa11.06□□□□□ -0.64
SSH3-210ENST00000532881 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
SSH3-210ENST00000532881 IGLL5B9A064 214 aa11.06□□□□□ -0.64
SSH3-210ENST00000532881 H3BMG7 143 aa11.06□□□□□ -0.64
SSH3-210ENST00000532881 RPL24P83731 157 aaKnown RBP11.06□□□□□ -0.64
SSH3-210ENST00000532881 NAV2Q8IVL1 2488 aa11.06□□□□□ -0.64
SSH3-210ENST00000532881 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
SSH3-210ENST00000532881 ID1P41134 155 aa11.05□□□□□ -0.64
SSH3-210ENST00000532881 MORN3Q6PF18 240 aaPredicted RBP11.05□□□□□ -0.64
SSH3-210ENST00000532881 TRBV7-3A0A075B6L6 115 aa11.05□□□□□ -0.64
SSH3-210ENST00000532881 ZNF815PA8K554 130 aa11.05□□□□□ -0.64
SSH3-210ENST00000532881 K7ERU9 68 aa11.05□□□□□ -0.64
SSH3-210ENST00000532881 KRTAP10-9P60411 292 aa11.05□□□□□ -0.64
SSH3-210ENST00000532881 ZNF56Q15929 161 aa11.05□□□□□ -0.64
SSH3-210ENST00000532881 IGLV4-69A0A075B6H9 119 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 PROK1P58294 105 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 Q9UF83 564 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 IGHV3-16A0A0C4DH30 117 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 A0A0J9YX75 114 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 KNCNA6PVL3 124 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 P0DMU3 169 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 FAM231AP0DMU4 169 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 FAM231CP0DMU5 169 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
SSH3-210ENST00000532881 SCGB2A2Q13296 93 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 WFDC2Q14508 124 aa11.04□□□□□ -0.64
SSH3-210ENST00000532881 TEX48A0A1B0GUV7 120 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 RBMY1A1P0DJD3 496 aaKnown RBP11.03□□□□□ -0.64
SSH3-210ENST00000532881 RBMY1CP0DJD4 496 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 RBMY1FQ15415 496 aaKnown RBP11.03□□□□□ -0.64
SSH3-210ENST00000532881 SCGB1D4Q6XE38 83 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 ZNF479Q96JC4 524 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 WNK1Q9H4A3 2382 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 BRI3O95415 125 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 TSPEAR-AS2P59090 65 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 NOTCH3Q9UM47 2321 aa11.03□□□□□ -0.64
SSH3-210ENST00000532881 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 K7EMT4 169 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 NXPH4O95158 308 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 HOXD3P31249 432 aaPredicted RBP11.02□□□□□ -0.65
SSH3-210ENST00000532881 SLURP1P55000 103 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 SH2D6Q7Z4S9 175 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 ZNRF2Q8NHG8 242 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 MED14OSP0DP75 135 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
SSH3-210ENST00000532881 NACAE9PAV3 2078 aa11.01□□□□□ -0.65
SSH3-210ENST00000532881 E9PLD3 99 aa11.01□□□□□ -0.65
SSH3-210ENST00000532881 G3V4G9 280 aa11.01□□□□□ -0.65
SSH3-210ENST00000532881 K7EQG2 157 aa11.01□□□□□ -0.65
SSH3-210ENST00000532881 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
SSH3-210ENST00000532881 PRRC2AP48634 2157 aaKnown RBP11.01□□□□□ -0.65
SSH3-210ENST00000532881 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
SSH3-210ENST00000532881 ZNF876PQ49A33 203 aa11□□□□□ -0.65
SSH3-210ENST00000532881 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
SSH3-210ENST00000532881 LINC01356Q8N9X3 169 aa11□□□□□ -0.65
SSH3-210ENST00000532881 OR5A1Q8NGJ0 315 aa11□□□□□ -0.65
SSH3-210ENST00000532881 KIR2DL4Q99706 377 aa11□□□□□ -0.65
SSH3-210ENST00000532881 ZNF580Q9UK33 172 aa11□□□□□ -0.65
SSH3-210ENST00000532881 A0A096LNT2 108 aa11□□□□□ -0.65
SSH3-210ENST00000532881 SRSF9Q13242 221 aaKnown RBP eCLIP11□□□□□ -0.65
SSH3-210ENST00000532881 M0QY20 66 aa10.99□□□□□ -0.65
SSH3-210ENST00000532881 COX6B1P14854 86 aa10.99□□□□□ -0.65
SSH3-210ENST00000532881 C9orf85Q96MD7 179 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms