RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 A0A1W2PRE2 83 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 MAP1LC3B2A6NCE7 125 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 GGTLC3B5MD39 225 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 SMKR1H3BMG3 65 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 ZNF324O75467 553 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 NXPH4O95158 308 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 IFNA7P01567 189 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 C1QBP02746 253 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 TCRAP04437 139 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 TPT1P13693 172 aaKnown RBP4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 FGF8P55075 233 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 RAB4BP61018 213 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 PRR9Q5T870 116 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 EIF5AL1Q6IS14 154 aaKnown RBP4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 Q6ZN92 141 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 EIF4E3Q8N5X7 224 aaKnown RBP4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 FAM213BQ8TBF2 198 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 LINC00467Q9BRT7 94 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 NDFIP1Q9BT67 221 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 MAP1LC3BQ9GZQ8 125 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 TMPRSS5Q9H3S3 457 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 NOP10Q9NPE3 64 aaKnown RBP4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 EPDR1Q9UM22 224 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 CSMD3Q7Z407 3707 aa4.08□□□□□ -1.76
HMGB1P42-201ENST00000532126 IGHV1OR15-1A0A075B7D0 117 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 TRAV8-1A0A0A6YYK1 113 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 F5H768 121 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 ATP5G1P05496 136 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 ATP5G3P48201 142 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 DAZ2Q13117 558 aaKnown RBP4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 LGALSLQ3ZCW2 172 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 LGALS9CQ6DKI2 356 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 DPPA3Q6W0C5 159 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 Q6ZQT7 251 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 CYB561D1Q8N8Q1 229 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 SFT2D1Q8WV19 159 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 FAM210BQ96KR6 192 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 NKX6-2Q9C056 277 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 APLNQ9ULZ1 77 aa4.07□□□□□ -1.76
HMGB1P42-201ENST00000532126 RYR3Q15413 4870 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 TRAV21A0A0B4J279 112 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 A0A1B0GV50 99 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 F6UZH7 168 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 PEX7O00628 323 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 IGLV2-11P01706 119 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 FLI1Q01543 452 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 ZFP69Q49AA0 526 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 IBA57Q5T440 356 aaKnown RBP4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 Q6AWC8 147 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 PRNTQ86SH4 94 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 TMEM75Q8N9X5 138 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 C11orf72Q8NBR9 251 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 MBD3L1Q8WWY6 194 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 HIST1H2BAQ96A08 127 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 TVP23CQ96ET8 276 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 TP53TG3Q9ULZ0 132 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 PSG8Q9UQ74 426 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 RYR2Q92736 4967 aa4.06□□□□□ -1.76
HMGB1P42-201ENST00000532126 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 TRGV2A0A075B6R0 118 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 IGHV3-38A0A0C4DH36 116 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 OR5AL1P0C617 328 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 RAB5CP51148 216 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 TCL1AP56279 114 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 TMEM183BQ1AE95 376 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 Q6ZTI0 123 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 TMEM183AQ8IXX5 376 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 C9orf62Q8N4C0 152 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 PTH2Q96A98 100 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 LINC00479Q96M42 142 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 TCEAL7Q9BRU2 100 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 SDF2L1Q9HCN8 221 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 MDFICQ9P1T7 246 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 Q9UF83 564 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 KLF12Q9Y4X4 402 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 ARL2-SNX15V9GYD0 113 aa4.05□□□□□ -1.76
HMGB1P42-201ENST00000532126 GNRH2O43555 120 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 SPINK4O60575 86 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 NUDT3O95989 172 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 PFN1P07737 140 aaKnown RBP4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 P0DMU3 169 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 FAM231AP0DMU4 169 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 FAM231CP0DMU5 169 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 ZNF80P51504 273 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 UBE2G1P62253 170 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 RPL32P62910 135 aaKnown RBP4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 RPL18AQ02543 176 aaKnown RBP4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 CD164Q04900 197 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 LGALS9BQ3B8N2 356 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 TDRG1Q3Y452 100 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 Q86TA4 180 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 RASL10AQ92737 203 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 FMC1Q96HJ9 113 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 KCNS1Q96KK3 526 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms