RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TENM2Q9NT68 2774 aa15.55■□□□□ 0.08
LRRK1-208ENST00000532029 LY6G6CO95867 125 aa15.54■□□□□ 0.08
LRRK1-208ENST00000532029 SMIM17P0DL12 118 aa15.54■□□□□ 0.08
LRRK1-208ENST00000532029 LINC00476Q8WZB0 136 aa15.54■□□□□ 0.08
LRRK1-208ENST00000532029 BORCS7Q96B45 105 aa15.54■□□□□ 0.08
LRRK1-208ENST00000532029 LCE6AA0A183 80 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 TRBV6-4A0A1B0GX49 114 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 FAM231BA6NCW3 169 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 CRYGDP07320 174 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 P0DMU3 169 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 FAM231AP0DMU4 169 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 FAM231CP0DMU5 169 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 RHOHQ15669 191 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 LGALS9CQ6DKI2 356 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 UFSP1Q6NVU6 142 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 SLC25A29Q8N8R3 303 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 PGLYRP4Q96LB8 373 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 PRADC1Q9BSG0 188 aa15.53■□□□□ 0.08
LRRK1-208ENST00000532029 TRGC1P0CF51 173 aa15.52■□□□□ 0.08
LRRK1-208ENST00000532029 GYPEP15421 78 aa15.52■□□□□ 0.08
LRRK1-208ENST00000532029 NTF3P20783 257 aa15.52■□□□□ 0.08
LRRK1-208ENST00000532029 FOXA3P55318 350 aaPredicted RBP15.52■□□□□ 0.08
LRRK1-208ENST00000532029 TWIST1Q15672 202 aa15.52■□□□□ 0.08
LRRK1-208ENST00000532029 C14orf178Q8N769 122 aaPredicted RBP15.52■□□□□ 0.08
LRRK1-208ENST00000532029 CNFNQ9BYD5 112 aa15.52■□□□□ 0.08
LRRK1-208ENST00000532029 MSRB1Q9NZV6 116 aa15.52■□□□□ 0.08
LRRK1-208ENST00000532029 A0A096LPF7 62 aa15.51■□□□□ 0.07
LRRK1-208ENST00000532029 PPP1R2P9O14990 202 aa15.51■□□□□ 0.07
LRRK1-208ENST00000532029 ADCYAP1P18509 176 aa15.51■□□□□ 0.07
LRRK1-208ENST00000532029 MRPL23Q16540 153 aaKnown RBP15.51■□□□□ 0.07
LRRK1-208ENST00000532029 UBE2DNLQ8IWF7 75 aa15.51■□□□□ 0.07
LRRK1-208ENST00000532029 SEC11CQ9BY50 192 aa15.51■□□□□ 0.07
LRRK1-208ENST00000532029 NACAE9PAV3 2078 aa15.5■□□□□ 0.07
LRRK1-208ENST00000532029 HIGD1CA8MV81 97 aa15.5■□□□□ 0.07
LRRK1-208ENST00000532029 K7EQD1 137 aa15.5■□□□□ 0.07
LRRK1-208ENST00000532029 ZNF56Q15929 161 aa15.5■□□□□ 0.07
LRRK1-208ENST00000532029 MT-ND4LP03901 98 aa15.49■□□□□ 0.07
LRRK1-208ENST00000532029 SRIP30626 198 aa15.49■□□□□ 0.07
LRRK1-208ENST00000532029 Q6ZSN1 163 aa15.49■□□□□ 0.07
LRRK1-208ENST00000532029 LOC100131303A0A0U1RQF7 123 aa15.48■□□□□ 0.07
LRRK1-208ENST00000532029 F5H697 171 aa15.48■□□□□ 0.07
LRRK1-208ENST00000532029 CCL18P55774 89 aa15.48■□□□□ 0.07
LRRK1-208ENST00000532029 NAT8BQ9UHF3 227 aa15.48■□□□□ 0.07
LRRK1-208ENST00000532029 RYR2Q92736 4967 aa15.47■□□□□ 0.07
LRRK1-208ENST00000532029 A0A1B0GUT8 65 aa15.47■□□□□ 0.07
LRRK1-208ENST00000532029 RAB4BP61018 213 aa15.47■□□□□ 0.07
LRRK1-208ENST00000532029 RNF212Q495C1 297 aa15.47■□□□□ 0.07
LRRK1-208ENST00000532029 SMIM15Q7Z3B0 74 aa15.47■□□□□ 0.07
LRRK1-208ENST00000532029 ANAPC16Q96DE5 110 aa15.47■□□□□ 0.07
LRRK1-208ENST00000532029 KIF25-AS1Q9Y6Z4 181 aa15.47■□□□□ 0.07
LRRK1-208ENST00000532029 SMIM27A0A1W2PRY6 76 aa15.46■□□□□ 0.07
LRRK1-208ENST00000532029 MGPP08493 103 aa15.46■□□□□ 0.07
LRRK1-208ENST00000532029 EVI2AP22794 236 aa15.46■□□□□ 0.07
LRRK1-208ENST00000532029 NUP35Q8NFH5 326 aa15.46■□□□□ 0.07
LRRK1-208ENST00000532029 DPH3P1Q9H4G8 78 aa15.46■□□□□ 0.07
LRRK1-208ENST00000532029 NEGR1Q7Z3B1 354 aa15.45■□□□□ 0.06
LRRK1-208ENST00000532029 SH2D6Q7Z4S9 175 aa15.45■□□□□ 0.06
LRRK1-208ENST00000532029 SACSQ9NZJ4 4579 aa15.44■□□□□ 0.06
LRRK1-208ENST00000532029 RIGQ13278 110 aa15.44■□□□□ 0.06
LRRK1-208ENST00000532029 ALMS1Q8TCU4 4167 aa15.44■□□□□ 0.06
LRRK1-208ENST00000532029 GAGE12JA6NER3 117 aa15.43■□□□□ 0.06
LRRK1-208ENST00000532029 GAGE1Q13065 139 aa15.43■□□□□ 0.06
LRRK1-208ENST00000532029 GAGE4Q13068 117 aa15.43■□□□□ 0.06
LRRK1-208ENST00000532029 GAGE5Q13069 117 aa15.43■□□□□ 0.06
LRRK1-208ENST00000532029 ESRGQ1W209 222 aa15.43■□□□□ 0.06
LRRK1-208ENST00000532029 GAGE13Q4V321 117 aa15.43■□□□□ 0.06
LRRK1-208ENST00000532029 TRBV10-1A0A0K0K1A3 114 aa15.42■□□□□ 0.06
LRRK1-208ENST00000532029 LINC00315P59091 139 aa15.42■□□□□ 0.06
LRRK1-208ENST00000532029 C10orf91Q5T1B1 145 aa15.42■□□□□ 0.06
LRRK1-208ENST00000532029 CARHSP1Q9Y2V2 147 aaKnown RBP15.42■□□□□ 0.06
LRRK1-208ENST00000532029 LINC00588Q9Y4M8 146 aa15.42■□□□□ 0.06
LRRK1-208ENST00000532029 FAM3BP58499 235 aaPredicted RBP15.41■□□□□ 0.06
LRRK1-208ENST00000532029 H7C1H1 209 aa15.4■□□□□ 0.06
LRRK1-208ENST00000532029 RPL36AP83881 106 aaKnown RBP15.4■□□□□ 0.06
LRRK1-208ENST00000532029 LYPD5Q6UWN5 251 aa15.4■□□□□ 0.06
LRRK1-208ENST00000532029 RPL36ALQ969Q0 106 aaKnown RBP15.4■□□□□ 0.06
LRRK1-208ENST00000532029 SUMO4Q6EEV6 95 aa15.39■□□□□ 0.05
LRRK1-208ENST00000532029 ATP6V0E2Q8NHE4 81 aa15.39■□□□□ 0.05
LRRK1-208ENST00000532029 ZNRF2Q8NHG8 242 aa15.39■□□□□ 0.05
LRRK1-208ENST00000532029 NDUFA5Q16718 116 aa15.38■□□□□ 0.05
LRRK1-208ENST00000532029 CTDSP1Q9GZU7 261 aa15.38■□□□□ 0.05
LRRK1-208ENST00000532029 Q9UF83 564 aa15.38■□□□□ 0.05
LRRK1-208ENST00000532029 MRPS16Q9Y3D3 137 aaKnown RBP15.38■□□□□ 0.05
LRRK1-208ENST00000532029 A0A1B0GW15 77 aa15.37■□□□□ 0.05
LRRK1-208ENST00000532029 TMEM191AQ9H0A3 160 aa15.37■□□□□ 0.05
LRRK1-208ENST00000532029 TRBV7-3A0A075B6L6 115 aa15.36■□□□□ 0.05
LRRK1-208ENST00000532029 LINC00694P0DN24 101 aa15.36■□□□□ 0.05
LRRK1-208ENST00000532029 NEXN-AS1Q8NBZ9 246 aa15.36■□□□□ 0.05
LRRK1-208ENST00000532029 M0QY20 66 aa15.35■□□□□ 0.05
LRRK1-208ENST00000532029 S100A8P05109 93 aa15.35■□□□□ 0.05
LRRK1-208ENST00000532029 CAMPP49913 170 aa15.35■□□□□ 0.05
LRRK1-208ENST00000532029 TIRAPP58753 221 aa15.35■□□□□ 0.05
LRRK1-208ENST00000532029 MRPL54Q6P161 138 aaKnown RBP15.35■□□□□ 0.05
LRRK1-208ENST00000532029 RASL11AQ6T310 242 aa15.35■□□□□ 0.05
LRRK1-208ENST00000532029 CLRN3Q8NCR9 226 aa15.35■□□□□ 0.05
LRRK1-208ENST00000532029 DNAH1Q9P2D7 4330 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 LYSTQ99698 3801 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 APOC3P02656 99 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 HBBP68871 147 aa15.34■□□□□ 0.05
LRRK1-208ENST00000532029 RHEBQ15382 184 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms