RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 PMVKQ15126 192 aa8.62□□□□□ -1.03
NXF1-211ENST00000531709 TAL2Q16559 108 aa8.62□□□□□ -1.03
NXF1-211ENST00000531709 RELNP78509 3460 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 A0A1B0GV72 72 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 SYNJ2BPP57105 145 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 SPXQ9BT56 116 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 CNFNQ9BYD5 112 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 NAV2Q8IVL1 2488 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 CENPEQ02224 2701 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 C11orf71Q6IPW1 123 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 AJUBAQ96IF1 538 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 LGALS1P09382 135 aaKnown RBP8.61□□□□□ -1.03
NXF1-211ENST00000531709 TM2D2Q9BX73 214 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 ADARB2-AS1A8MUL3 147 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 TNFRSF18Q9Y5U5 241 aa8.61□□□□□ -1.03
NXF1-211ENST00000531709 A0A0U1RRA0 63 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 C11orf86A6NJI1 115 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 LENEPQ9Y5L5 61 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 A8MWV9 139 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
NXF1-211ENST00000531709 ZFAND2AQ8N6M9 145 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 OPRPNQ99935 248 aaPredicted RBP8.6□□□□□ -1.03
NXF1-211ENST00000531709 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 PTH2Q96A98 100 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 PLEKHB2Q96CS7 222 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 DUX3Q96PT4 197 aa8.6□□□□□ -1.03
NXF1-211ENST00000531709 E9PLD3 99 aa8.59□□□□□ -1.03
NXF1-211ENST00000531709 CD28P10747 220 aa8.59□□□□□ -1.03
NXF1-211ENST00000531709 ZFYVE26Q68DK2 2539 aa8.59□□□□□ -1.03
NXF1-211ENST00000531709 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
NXF1-211ENST00000531709 SPAG8Q99932 426 aaPredicted RBP8.58□□□□□ -1.04
NXF1-211ENST00000531709 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
NXF1-211ENST00000531709 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
NXF1-211ENST00000531709 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
NXF1-211ENST00000531709 ERG28Q9UKR5 140 aa8.58□□□□□ -1.04
NXF1-211ENST00000531709 J3QQQ9 107 aa8.58□□□□□ -1.04
NXF1-211ENST00000531709 DYNLRB2Q8TF09 96 aa8.58□□□□□ -1.04
NXF1-211ENST00000531709 ASH1LQ9NR48 2969 aaKnown RBP8.58□□□□□ -1.04
NXF1-211ENST00000531709 C9JAW5 83 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 SPINK8P0C7L1 97 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 NEXN-AS1Q8NBZ9 246 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 CKS1BP61024 79 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 C19orf84I3L1E1 186 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 INSL3P51460 131 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 Q6ZS46 218 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 ZMAT4Q9H898 229 aa8.57□□□□□ -1.04
NXF1-211ENST00000531709 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
NXF1-211ENST00000531709 ITLN2Q8WWU7 325 aaPredicted RBP8.56□□□□□ -1.04
NXF1-211ENST00000531709 CSMD1Q96PZ7 3565 aa8.56□□□□□ -1.04
NXF1-211ENST00000531709 MSMBP08118 114 aa8.56□□□□□ -1.04
NXF1-211ENST00000531709 LRRK2Q5S007 2527 aa8.56□□□□□ -1.04
NXF1-211ENST00000531709 PHLDA1Q8WV24 401 aaPredicted RBP8.56□□□□□ -1.04
NXF1-211ENST00000531709 EDN2P20800 178 aa8.56□□□□□ -1.04
NXF1-211ENST00000531709 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
NXF1-211ENST00000531709 LINC01587Q99440 93 aa8.56□□□□□ -1.04
NXF1-211ENST00000531709 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
NXF1-211ENST00000531709 COX6CP09669 75 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 NRGNQ92686 78 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 NOTCH2Q04721 2471 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 IGHV4-30-2A0A087WSY4 118 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 IGHV4-59P01825 116 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 PRO1854Q9UHT4 67 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 IGHV1OR15-1A0A075B7D0 117 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 Q8N1Y9 231 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
NXF1-211ENST00000531709 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
NXF1-211ENST00000531709 RNASE3P12724 160 aaKnown RBP8.54□□□□□ -1.04
NXF1-211ENST00000531709 DEFB131AP59861 70 aa8.54□□□□□ -1.04
NXF1-211ENST00000531709 IGHV3-16A0A0C4DH30 117 aa8.54□□□□□ -1.04
NXF1-211ENST00000531709 IGHV3-38A0A0C4DH36 116 aa8.54□□□□□ -1.04
NXF1-211ENST00000531709 IGKV3OR2-268A0A0C4DH90 116 aa8.54□□□□□ -1.04
NXF1-211ENST00000531709 B4DSR2 109 aa8.54□□□□□ -1.04
NXF1-211ENST00000531709 TRPT1Q86TN4 253 aaKnown RBP8.54□□□□□ -1.04
NXF1-211ENST00000531709 PIFOQ8TCI5 191 aa8.54□□□□□ -1.04
NXF1-211ENST00000531709 C10orf99Q6UWK7 81 aa8.53□□□□□ -1.04
NXF1-211ENST00000531709 A4D1N5 150 aa8.53□□□□□ -1.04
NXF1-211ENST00000531709 IGHG2P01859 326 aa8.53□□□□□ -1.04
NXF1-211ENST00000531709 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
NXF1-211ENST00000531709 TIMM21Q9BVV7 248 aa8.53□□□□□ -1.04
NXF1-211ENST00000531709 ABCA12Q86UK0 2595 aa8.53□□□□□ -1.04
NXF1-211ENST00000531709 TSPAN13O95857 204 aa8.52□□□□□ -1.04
NXF1-211ENST00000531709 I3L3M4 83 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 TRBV7-3A0A075B6L6 115 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 FOXI1Q12951 378 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 DEFB136Q30KP8 78 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 U3KQE9 123 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 IGHV4-4A0A075B6R2 117 aa8.52□□□□□ -1.05
NXF1-211ENST00000531709 CEMP1Q6PRD7 247 aaPredicted RBP8.52□□□□□ -1.05
NXF1-211ENST00000531709 SNCGO76070 127 aa8.51□□□□□ -1.05
NXF1-211ENST00000531709 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
NXF1-211ENST00000531709 DEFB112Q30KQ8 113 aa8.51□□□□□ -1.05
NXF1-211ENST00000531709 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
NXF1-211ENST00000531709 PPDPFLQ8WWR9 84 aa8.51□□□□□ -1.05
NXF1-211ENST00000531709 C1QTNF4Q9BXJ3 329 aa8.51□□□□□ -1.05
NXF1-211ENST00000531709 A0A1W2PRX2 142 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms