RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 ZNF524Q96C55 264 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 A0A0J9YWU9 116 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 WNK3Q9BYP7 1800 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 K7EIM0 57 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 CXCL5P42830 114 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 Q8NFD4 153 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
LRRK1-207ENST00000531270 MYCNOSP40205 109 aa11.27□□□□□ -0.6
LRRK1-207ENST00000531270 LINC01545Q5VT33 79 aa11.27□□□□□ -0.6
LRRK1-207ENST00000531270 CEMP1Q6PRD7 247 aaPredicted RBP11.27□□□□□ -0.6
LRRK1-207ENST00000531270 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.61
LRRK1-207ENST00000531270 USP17L23D6RBM5 183 aa11.27□□□□□ -0.61
LRRK1-207ENST00000531270 IL15RAQ13261 267 aa11.27□□□□□ -0.61
LRRK1-207ENST00000531270 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.61
LRRK1-207ENST00000531270 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
LRRK1-207ENST00000531270 PLA2G2CQ5R387 149 aa11.27□□□□□ -0.61
LRRK1-207ENST00000531270 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.61
LRRK1-207ENST00000531270 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 J3KT08 172 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 SCXQ7RTU7 201 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 C10orf105Q8TEF2 133 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 RALGAPA2Q2PPJ7 1873 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 K7ERS5 55 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 FXYD2P54710 66 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 FOXI1Q12951 378 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 WFDC2Q14508 124 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 DOCK11Q5JSL3 2073 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
LRRK1-207ENST00000531270 C3orf22Q8N5N4 141 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 C11orf53Q8IXP5 236 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 BPY2O14599 106 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 MDFICQ9P1T7 246 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 WT1P19544 449 aaPredicted RBP11.25□□□□□ -0.61
LRRK1-207ENST00000531270 Q8N9W7 124 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
LRRK1-207ENST00000531270 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.24□□□□□ -0.61
LRRK1-207ENST00000531270 TOMM6Q96B49 74 aa11.24□□□□□ -0.61
LRRK1-207ENST00000531270 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
LRRK1-207ENST00000531270 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
LRRK1-207ENST00000531270 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
LRRK1-207ENST00000531270 SLX1AQ9BQ83 275 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 LRRC37A2A6NM11 1700 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 C14orf177Q52M58 125 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 IL17DQ8TAD2 202 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 DYSFO75923 2080 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 P0DMU3 169 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 FAM231AP0DMU4 169 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 FAM231CP0DMU5 169 aa11.23□□□□□ -0.61
LRRK1-207ENST00000531270 CRYGDP07320 174 aa11.22□□□□□ -0.61
LRRK1-207ENST00000531270 TEN1Q86WV5 123 aa11.22□□□□□ -0.61
LRRK1-207ENST00000531270 HRCT1Q6UXD1 115 aa11.22□□□□□ -0.61
LRRK1-207ENST00000531270 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
LRRK1-207ENST00000531270 LYPD6Q86Y78 171 aa11.22□□□□□ -0.61
LRRK1-207ENST00000531270 C11orf86A6NJI1 115 aa11.22□□□□□ -0.61
LRRK1-207ENST00000531270 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
LRRK1-207ENST00000531270 WDR90Q96KV7 1748 aa11.21□□□□□ -0.61
LRRK1-207ENST00000531270 Q6ZUT4 128 aa11.21□□□□□ -0.61
LRRK1-207ENST00000531270 TMEM263Q8WUH6 116 aaKnown RBP11.21□□□□□ -0.61
LRRK1-207ENST00000531270 NUPR1O60356 82 aa11.21□□□□□ -0.62
LRRK1-207ENST00000531270 PTPRDP23468 1912 aa11.21□□□□□ -0.62
LRRK1-207ENST00000531270 TAX1BP3O14907 124 aa11.21□□□□□ -0.62
LRRK1-207ENST00000531270 ADORA2A-AS1P86434 159 aa11.2□□□□□ -0.62
LRRK1-207ENST00000531270 LCTP09848 1927 aa11.2□□□□□ -0.62
LRRK1-207ENST00000531270 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
LRRK1-207ENST00000531270 GTF3C1Q12789 2109 aa11.2□□□□□ -0.62
LRRK1-207ENST00000531270 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
LRRK1-207ENST00000531270 TEX49A0A1B0GTD5 131 aa11.2□□□□□ -0.62
LRRK1-207ENST00000531270 REG3AQ06141 175 aa11.2□□□□□ -0.62
LRRK1-207ENST00000531270 DNAJC9-AS1A6NH13 148 aa11.19□□□□□ -0.62
LRRK1-207ENST00000531270 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
LRRK1-207ENST00000531270 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
LRRK1-207ENST00000531270 PTH2Q96A98 100 aa11.19□□□□□ -0.62
LRRK1-207ENST00000531270 XIRP1Q702N8 1843 aaKnown RBP11.19□□□□□ -0.62
LRRK1-207ENST00000531270 UNQ9165/PRO28630Q6UXU0 137 aa11.19□□□□□ -0.62
LRRK1-207ENST00000531270 UBE2D1P51668 147 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 TDRG1Q3Y452 100 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 MAP6D1Q9H9H5 199 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 ZNF407Q9C0G0 2248 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 CNOT1A5YKK6 2376 aaKnown RBP11.18□□□□□ -0.62
LRRK1-207ENST00000531270 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 TP53TG3Q9ULZ0 132 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 DOCK8Q8NF50 2099 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 M0R2N4 97 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 SLPIP03973 132 aa11.18□□□□□ -0.62
LRRK1-207ENST00000531270 E9PLD3 99 aa11.17□□□□□ -0.62
LRRK1-207ENST00000531270 UBE2D4Q9Y2X8 147 aa11.17□□□□□ -0.62
LRRK1-207ENST00000531270 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
LRRK1-207ENST00000531270 ROS1P08922 2347 aa11.17□□□□□ -0.62
LRRK1-207ENST00000531270 PKDREJQ9NTG1 2253 aa11.17□□□□□ -0.62
LRRK1-207ENST00000531270 MRPL55Q7Z7F7 128 aaKnown RBP11.17□□□□□ -0.62
LRRK1-207ENST00000531270 KIR2DL5BQ8NHK3 375 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms