RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 UQCC1Q9NVA1 299 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 IGHV3-64A0A075B6Q5 118 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 RBAKDNA6NC62 111 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 PGPA6NDG6 321 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 SSNA1O43805 119 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 CST7O76096 145 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 ZNF506Q5JVG8 444 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 KCNIP4Q6PIL6 250 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 ENHOQ6UWT2 76 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 PHYHIPLQ96FC7 376 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 MARVELD1Q9BSK0 173 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 NMES1Q9C002 83 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 VAX2Q9UIW0 290 aa5.11□□□□□ -1.59
CD44-232ENST00000531118 FAM24AA6NFZ4 105 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 F6UZH7 168 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 BAXQ07812 192 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 IL15RAQ13261 267 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 TMEM252Q8N6L7 170 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 SLC25A2Q9BXI2 301 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 SAMD10Q9BYL1 202 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 PARLQ9H300 379 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 KCNIP2Q9NS61 270 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 Q9UF83 564 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 LENEPQ9Y5L5 61 aa5.1□□□□□ -1.59
CD44-232ENST00000531118 TRAV21A0A0B4J279 112 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 UBE2L5PA0A1B0GUS4 154 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 RPL29P47914 159 aaKnown RBP5.09□□□□□ -1.59
CD44-232ENST00000531118 IFITM3Q01628 133 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 LRRC37A5PQ49AS3 106 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 C14orf178Q8N769 122 aaPredicted RBP5.09□□□□□ -1.59
CD44-232ENST00000531118 C15orf54Q8N8G6 183 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 GTSF1Q8WW33 167 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 ASB13Q8WXK3 278 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 DPH3Q96FX2 82 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 KCNS1Q96KK3 526 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 LINC00479Q96M42 142 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 C9orf85Q96MD7 179 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 WDR83OSQ9Y284 106 aa5.09□□□□□ -1.59
CD44-232ENST00000531118 MUC21A0A0G2JKD1 596 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 IGSF23A1L1A6 192 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 PGPEP1LA6NFU8 196 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 C17orf112F2Z3M2 114 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 H0YIZ8 118 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 H7C1H1 209 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 TAAR5O14804 337 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 SIX6O95475 246 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 PTTG1O95997 202 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 FGF7P21781 194 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 CSN1S1P47710 185 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 MIAQ16674 131 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 MPV17L2Q567V2 206 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 ZFP2Q6ZN57 461 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 TMED6Q8WW62 240 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 FAM167A-AS1Q96KT0 104 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 C11orf1Q9H5F2 150 aa5.08□□□□□ -1.6
CD44-232ENST00000531118 TRAV26-2A0A0B4J265 109 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 hDV102S1A0JD36 115 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 ANGP03950 147 aaKnown RBP5.07□□□□□ -1.6
CD44-232ENST00000531118 NPSP0C0P6 89 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 NBEAP1P0C6P0 100 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 FGF8P55075 233 aaPredicted RBP5.07□□□□□ -1.6
CD44-232ENST00000531118 SRSF9Q13242 221 aaKnown RBP eCLIP5.07□□□□□ -1.6
CD44-232ENST00000531118 GCSAMLQ5JQS6 135 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 KRTAP26-1Q6PEX3 210 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 OR10G7Q8NGN6 311 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 OR5C1Q8NGR4 320 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 OR2T35Q8NGX2 323 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 PPP1R1CQ8WVI7 109 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 PTH2Q96A98 100 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 FXYD5Q96DB9 178 aa5.07□□□□□ -1.6
CD44-232ENST00000531118 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.06□□□□□ -1.6
CD44-232ENST00000531118 FAM231BA6NCW3 169 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 MPC2O95563 127 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 H2BFSP57053 126 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 MAJINQ3KP22 176 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 UFSP1Q6NVU6 142 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 CLPSL2Q6UWE3 100 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 MIR17HGQ75NE6 70 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 OR2G3Q8NGZ4 309 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 THAP6Q8TBB0 222 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 SCGB1C1Q8TD33 95 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 NPCDR1Q9BY65 106 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 MED28Q9H204 178 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 OR5AC2Q9NZP5 309 aa5.06□□□□□ -1.6
CD44-232ENST00000531118 IGKV2-24A0A0C4DH68 120 aa5.05□□□□□ -1.6
CD44-232ENST00000531118 A8MWV9 139 aa5.05□□□□□ -1.6
CD44-232ENST00000531118 RNASE3P12724 160 aaKnown RBP5.05□□□□□ -1.6
CD44-232ENST00000531118 RPL12P30050 165 aaKnown RBP5.05□□□□□ -1.6
CD44-232ENST00000531118 SUMO2P61956 95 aaKnown RBP5.05□□□□□ -1.6
CD44-232ENST00000531118 PRR4Q16378 134 aa5.05□□□□□ -1.6
CD44-232ENST00000531118 SUMO4Q6EEV6 95 aa5.05□□□□□ -1.6
CD44-232ENST00000531118 TMEM75Q8N9X5 138 aa5.05□□□□□ -1.6
CD44-232ENST00000531118 LYPD6BQ8NI32 183 aa5.05□□□□□ -1.6
CD44-232ENST00000531118 TMEM262E9PQX1 116 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 ZNF664Q8N3J9 261 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 STPG4Q8N801 248 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 TVP23CQ96ET8 276 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 WDR61Q9GZS3 305 aaKnown RBP5.04□□□□□ -1.6
CD44-232ENST00000531118 JPT2Q9H910 190 aa5.04□□□□□ -1.6
CD44-232ENST00000531118 TREM1Q9NP99 234 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms