RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 FXYD2P54710 66 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 LINC01356Q8N9X3 169 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 CFAP46Q8IYW2 2715 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 LINC01549A6NIU2 74 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 DUSP14O95147 198 aaKnown RBP9.47□□□□□ -0.89
SCN3B-206ENST00000530277 PRM2P04554 102 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 HLA-DRB4P13762 266 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 HIST2H2BCQ6DN03 193 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 HLA-DRB4X5D2U9 266 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 PRSS29PA6NIE9 313 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
SCN3B-206ENST00000530277 LY6LH3BQJ8 138 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 PLNP26678 52 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 OR13C6PQ8NH95 151 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
SCN3B-206ENST00000530277 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.89
SCN3B-206ENST00000530277 GAGE13Q4V321 117 aa9.46□□□□□ -0.89
SCN3B-206ENST00000530277 SCRT2Q9NQ03 307 aa9.46□□□□□ -0.89
SCN3B-206ENST00000530277 ODF3BA8MYP8 253 aa9.46□□□□□ -0.9
SCN3B-206ENST00000530277 EDN2P20800 178 aa9.46□□□□□ -0.9
SCN3B-206ENST00000530277 HOXD3P31249 432 aaPredicted RBP9.46□□□□□ -0.9
SCN3B-206ENST00000530277 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
SCN3B-206ENST00000530277 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
SCN3B-206ENST00000530277 F8VRH5 84 aa9.45□□□□□ -0.9
SCN3B-206ENST00000530277 DEFB130BP0DP73 79 aa9.45□□□□□ -0.9
SCN3B-206ENST00000530277 DEFB130AP0DP74 79 aa9.45□□□□□ -0.9
SCN3B-206ENST00000530277 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
SCN3B-206ENST00000530277 PEMTQ9UBM1 199 aa9.45□□□□□ -0.9
SCN3B-206ENST00000530277 FLNCQ14315 2725 aa9.45□□□□□ -0.9
SCN3B-206ENST00000530277 FBXL19-AS1Q494R0 122 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 COX6CP09669 75 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 C20orf173Q96LM9 149 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 C9orf118A6NHY6 69 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 CTRLP40313 264 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 PAPPA-AS1Q5QFB9 102 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 C10orf105Q8TEF2 133 aa9.44□□□□□ -0.9
SCN3B-206ENST00000530277 ASH1LQ9NR48 2969 aaKnown RBP9.43□□□□□ -0.9
SCN3B-206ENST00000530277 IGHV1OR15-1A0A075B7D0 117 aa9.43□□□□□ -0.9
SCN3B-206ENST00000530277 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
SCN3B-206ENST00000530277 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
SCN3B-206ENST00000530277 TNFRSF13BO14836 293 aaPredicted RBP9.43□□□□□ -0.9
SCN3B-206ENST00000530277 TRAV8-2A0A0B4J237 113 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 C16orf54Q6UWD8 224 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 RELNP78509 3460 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 GAGE4Q13068 117 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 GAGE5Q13069 117 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 Q8N976 141 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 CHD6Q8TD26 2715 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 IGHV4OR15-8A0A075B7B6 117 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 A0A087WW49 117 aa9.42□□□□□ -0.9
SCN3B-206ENST00000530277 CEMP1Q6PRD7 247 aaPredicted RBP9.42□□□□□ -0.9
SCN3B-206ENST00000530277 A0A096LPF7 62 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 WFDC2Q14508 124 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 Q8N1Y9 231 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
SCN3B-206ENST00000530277 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
SCN3B-206ENST00000530277 P0DMU3 169 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
SCN3B-206ENST00000530277 MRGPRG-AS1Q2M3A8 158 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 PRR9Q5T870 116 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 H3BRM9 83 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 LINC01559Q495D7 138 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 SS18L2Q9UHA2 77 aa9.41□□□□□ -0.9
SCN3B-206ENST00000530277 A0A1W2PPM0 123 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 ODF1Q14990 250 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 OR5A1Q8NGJ0 315 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 ANAPC13Q9BS18 74 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 ZFAND3Q9H8U3 227 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 A0A087WX48 190 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 MYMXA0A1B0GTQ4 84 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 ZNRF2Q8NHG8 242 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 SPINK8P0C7L1 97 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 C11orf71Q6IPW1 123 aa9.4□□□□□ -0.9
SCN3B-206ENST00000530277 A0A0J9YXV3 536 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 PMVKQ15126 192 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 C3orf56Q8N813 242 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 GATD1Q8NB37 220 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 ERG28Q9UKR5 140 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 FLNAP21333 2647 aaKnown RBP9.39□□□□□ -0.91
SCN3B-206ENST00000530277 K7EP34 96 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 GAGE7O76087 117 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 AVPP01185 164 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 GAGE12FP0CL80 117 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 GAGE12GP0CL81 117 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 GAGE12IP0CL82 117 aa9.39□□□□□ -0.91
SCN3B-206ENST00000530277 C9JAW5 83 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 FSTL3O95633 263 aa9.38□□□□□ -0.91
SCN3B-206ENST00000530277 CEND1Q8N111 149 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms