RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 MUC4Q99102 2169 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 PPBPP02775 128 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 APOC4P55056 127 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 GAS8-AS1O95177 125 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 AZU1P20160 251 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 CSNK1G2-AS1Q8NCQ2 148 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 JPT2Q9H910 190 aa10.42□□□□□ -0.74
TTC39A-216ENST00000530004 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
TTC39A-216ENST00000530004 NPYP01303 97 aa10.41□□□□□ -0.74
TTC39A-216ENST00000530004 MGPP08493 103 aa10.41□□□□□ -0.74
TTC39A-216ENST00000530004 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
TTC39A-216ENST00000530004 RNASEKQ6P5S7 137 aaKnown RBP10.41□□□□□ -0.74
TTC39A-216ENST00000530004 NIT1Q86X76 327 aa10.41□□□□□ -0.74
TTC39A-216ENST00000530004 URB1-AS1Q96HZ7 61 aa10.41□□□□□ -0.74
TTC39A-216ENST00000530004 GATA1P15976 413 aaPredicted RBP10.4□□□□□ -0.74
TTC39A-216ENST00000530004 PACRGQ96M98 296 aaPredicted RBP10.4□□□□□ -0.74
TTC39A-216ENST00000530004 SAMD10Q9BYL1 202 aa10.4□□□□□ -0.74
TTC39A-216ENST00000530004 KIF25-AS1Q9Y6Z4 181 aa10.4□□□□□ -0.74
TTC39A-216ENST00000530004 A0A087WWL8 130 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 M0R2P5 195 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 OR10D4PQ8NGN7 298 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 HSBP1O75506 76 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 TNFRSF6BO95407 300 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 LINC00614P0C842 121 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 SBSPONQ8IVN8 264 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 RNASE8Q8TDE3 154 aaKnown RBP10.39□□□□□ -0.75
TTC39A-216ENST00000530004 SPXQ9BT56 116 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 LAMTOR2Q9Y2Q5 125 aa10.39□□□□□ -0.75
TTC39A-216ENST00000530004 PMCHP20382 165 aa10.38□□□□□ -0.75
TTC39A-216ENST00000530004 LINC00315P59091 139 aa10.38□□□□□ -0.75
TTC39A-216ENST00000530004 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
TTC39A-216ENST00000530004 ZNF705AQ6ZN79 300 aaPredicted RBP10.38□□□□□ -0.75
TTC39A-216ENST00000530004 PRSS3P2Q8NHM4 247 aa10.38□□□□□ -0.75
TTC39A-216ENST00000530004 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
TTC39A-216ENST00000530004 CHCHD1Q96BP2 118 aaKnown RBP10.38□□□□□ -0.75
TTC39A-216ENST00000530004 IFI27P40305 119 aaPredicted RBP10.37□□□□□ -0.75
TTC39A-216ENST00000530004 AMTP48728 403 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 Q6ZWC4 215 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 FAM19A2Q8N3H0 131 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 NRACQ8N912 160 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 PTH2Q96A98 100 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 MAP1LC3AQ9H492 121 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 CRYGDP07320 174 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 DEFB135Q30KP9 77 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 FA2HQ7L5A8 372 aa10.37□□□□□ -0.75
TTC39A-216ENST00000530004 IL17DQ8TAD2 202 aa10.36□□□□□ -0.75
TTC39A-216ENST00000530004 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
TTC39A-216ENST00000530004 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
TTC39A-216ENST00000530004 MRPL16Q9NX20 251 aaKnown RBP10.36□□□□□ -0.75
TTC39A-216ENST00000530004 F5H697 171 aa10.35□□□□□ -0.75
TTC39A-216ENST00000530004 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
TTC39A-216ENST00000530004 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
TTC39A-216ENST00000530004 RASL10AQ92737 203 aa10.35□□□□□ -0.75
TTC39A-216ENST00000530004 AP5S1Q9NUS5 200 aa10.35□□□□□ -0.75
TTC39A-216ENST00000530004 A8MWV9 139 aa10.34□□□□□ -0.75
TTC39A-216ENST00000530004 ZNF56Q15929 161 aa10.34□□□□□ -0.75
TTC39A-216ENST00000530004 PMCHL1Q16048 86 aa10.34□□□□□ -0.75
TTC39A-216ENST00000530004 RNF183Q96D59 192 aa10.34□□□□□ -0.75
TTC39A-216ENST00000530004 RPL39LQ96EH5 51 aaKnown RBP10.34□□□□□ -0.75
TTC39A-216ENST00000530004 TM2D3Q9BRN9 247 aa10.34□□□□□ -0.75
TTC39A-216ENST00000530004 TRGV1A0A0A0MS02 117 aa10.33□□□□□ -0.76
TTC39A-216ENST00000530004 IGHV1-24A0A0C4DH33 117 aa10.33□□□□□ -0.76
TTC39A-216ENST00000530004 PLAC8L1A1L4L8 177 aa10.33□□□□□ -0.76
TTC39A-216ENST00000530004 TP53TG1Q9Y2A0 90 aa10.33□□□□□ -0.76
TTC39A-216ENST00000530004 MEGF8Q7Z7M0 2845 aa10.33□□□□□ -0.76
TTC39A-216ENST00000530004 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
TTC39A-216ENST00000530004 PPP1R17O96001 155 aa10.32□□□□□ -0.76
TTC39A-216ENST00000530004 CFAP126Q5VTH2 177 aa10.32□□□□□ -0.76
TTC39A-216ENST00000530004 SPATA25Q9BR10 227 aa10.32□□□□□ -0.76
TTC39A-216ENST00000530004 OVOL2Q9BRP0 275 aa10.32□□□□□ -0.76
TTC39A-216ENST00000530004 RETNQ9HD89 108 aa10.32□□□□□ -0.76
TTC39A-216ENST00000530004 NOP10Q9NPE3 64 aaKnown RBP10.32□□□□□ -0.76
TTC39A-216ENST00000530004 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
TTC39A-216ENST00000530004 PRSS47A8MTI9 375 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 SUMO2P61956 95 aaKnown RBP10.31□□□□□ -0.76
TTC39A-216ENST00000530004 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
TTC39A-216ENST00000530004 Q6ZTI0 123 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 C20orf78Q9BR46 151 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 NDUFAF3Q9BU61 184 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 SMIM6P0DI80 62 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 LGALS9BQ3B8N2 356 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 UFSP1Q6NVU6 142 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 Q8N8P6 123 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 X6R8D5 127 aa10.31□□□□□ -0.76
TTC39A-216ENST00000530004 M0QY20 66 aa10.3□□□□□ -0.76
TTC39A-216ENST00000530004 RS1O15537 224 aa10.3□□□□□ -0.76
TTC39A-216ENST00000530004 OR11H2Q8NH07 326 aa10.3□□□□□ -0.76
TTC39A-216ENST00000530004 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
TTC39A-216ENST00000530004 ZMAT4Q9H898 229 aa10.3□□□□□ -0.76
TTC39A-216ENST00000530004 RHODO00212 210 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms