RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
ECHDC1-220ENST00000528402 SPXQ9BT56 116 aa10.87□□□□□ -0.67
ECHDC1-220ENST00000528402 SORL1Q92673 2214 aa10.87□□□□□ -0.67
ECHDC1-220ENST00000528402 F5H697 171 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 PRSS1P07477 247 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 ZNF415Q09FC8 603 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 MAJINQ3KP22 176 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 STHQ8IWL8 128 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 SNHG12Q9BXW3 62 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 UNC79Q9P2D8 2635 aa10.86□□□□□ -0.67
ECHDC1-220ENST00000528402 RBMY1BA6NDE4 496 aaKnown RBP10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 RBMY1EA6NEQ0 496 aaKnown RBP10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 H7C1H1 209 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 SPRY2O43597 315 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 CRYGDP07320 174 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 RBMY1DP0C7P1 496 aaKnown RBP10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 FXYD7P58549 80 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 ZNF876PQ49A33 203 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 SUMO4Q6EEV6 95 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 SLC25A34Q6PIV7 304 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 TOMM6Q96B49 74 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 ZMAT4Q9H898 229 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 NBPF19A0A087WUL8 3843 aa10.85□□□□□ -0.67
ECHDC1-220ENST00000528402 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 A8MWV9 139 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 M0R2P5 195 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 ODF3L2Q3SX64 289 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 TRPT1Q86TN4 253 aaKnown RBP10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 LURAP1LQ8IV03 231 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 KIR2DL4Q99706 377 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 CSTL1Q9H114 145 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 TRAV12-1A0A0B4J245 112 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 SAP30O75446 220 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 IGLV1-51P01701 117 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 C18orf15Q96N68 181 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 LINC01587Q99440 93 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 SMR3AQ99954 134 aa10.84□□□□□ -0.67
ECHDC1-220ENST00000528402 HIVEP2P31629 2446 aa10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 A0A087WWL8 130 aa10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 COX8AP10176 69 aa10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 MCRIP2Q9BUT9 160 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 JPT2Q9H910 190 aa10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 ITPR2Q14571 2701 aa10.83□□□□□ -0.68
ECHDC1-220ENST00000528402 M0QY20 66 aa10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 RBMY1A1P0DJD3 496 aaKnown RBP10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 RBMY1CP0DJD4 496 aa10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 ODF1Q14990 250 aa10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 ZNF56Q15929 161 aa10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 SCGB3A1Q96QR1 104 aa10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 ACANP16112 2415 aa10.82□□□□□ -0.68
ECHDC1-220ENST00000528402 A0A087WX48 190 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 RHODO00212 210 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 EREGO14944 169 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 DPM2O94777 84 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 IGKCP01834 107 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 ZNF124Q15973 351 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 BEAN1Q3B7T3 259 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 ERASQ7Z444 233 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 CYSLTR1Q9Y271 337 aa10.81□□□□□ -0.68
ECHDC1-220ENST00000528402 ZNF469Q96JG9 3925 aaPredicted RBP10.8□□□□□ -0.68
ECHDC1-220ENST00000528402 SDHAF1A6NFY7 115 aa10.8□□□□□ -0.68
ECHDC1-220ENST00000528402 DLEU1O43261 78 aa10.8□□□□□ -0.68
ECHDC1-220ENST00000528402 RHOHQ15669 191 aa10.8□□□□□ -0.68
ECHDC1-220ENST00000528402 NSUN5P1Q3KNT7 163 aa10.8□□□□□ -0.68
ECHDC1-220ENST00000528402 FAM74A4Q5TZK3 123 aa10.8□□□□□ -0.68
ECHDC1-220ENST00000528402 C2orf66Q6UXQ4 117 aa10.8□□□□□ -0.68
ECHDC1-220ENST00000528402 SIVA1O15304 175 aa10.79□□□□□ -0.68
ECHDC1-220ENST00000528402 PLNP26678 52 aa10.79□□□□□ -0.68
ECHDC1-220ENST00000528402 RIPPLY3P57055 190 aa10.79□□□□□ -0.68
ECHDC1-220ENST00000528402 COL5A1-AS1Q5SY13 56 aa10.79□□□□□ -0.68
ECHDC1-220ENST00000528402 TMEM141Q96I45 108 aa10.79□□□□□ -0.68
ECHDC1-220ENST00000528402 C1QTNF4Q9BXJ3 329 aa10.79□□□□□ -0.68
ECHDC1-220ENST00000528402 DKK2Q9UBU2 259 aa10.79□□□□□ -0.68
ECHDC1-220ENST00000528402 HTN1P15515 57 aa10.78□□□□□ -0.68
ECHDC1-220ENST00000528402 INSL3P51460 131 aa10.78□□□□□ -0.68
ECHDC1-220ENST00000528402 HIST2H2BDQ6DRA6 164 aa10.78□□□□□ -0.68
ECHDC1-220ENST00000528402 MORN3Q6PF18 240 aaPredicted RBP10.78□□□□□ -0.68
ECHDC1-220ENST00000528402 ZFP2Q6ZN57 461 aa10.78□□□□□ -0.68
ECHDC1-220ENST00000528402 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
ECHDC1-220ENST00000528402 TMEM208Q9BTX3 173 aa10.78□□□□□ -0.68
ECHDC1-220ENST00000528402 INAFM1C9JVW0 142 aa10.77□□□□□ -0.68
ECHDC1-220ENST00000528402 PF4P02776 101 aa10.77□□□□□ -0.68
ECHDC1-220ENST00000528402 C12orf54Q6X4T0 127 aa10.77□□□□□ -0.68
ECHDC1-220ENST00000528402 DNAJC30Q96LL9 226 aa10.77□□□□□ -0.68
ECHDC1-220ENST00000528402 F8VRH5 84 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 I3L3M4 83 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 CRLF1O75462 422 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 PAPPA-AS1Q5QFB9 102 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 UFSP1Q6NVU6 142 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 BOD1L2Q8IYS8 172 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 NEXN-AS1Q8NBZ9 246 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 TIMM17AQ99595 171 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 XCL2Q9UBD3 114 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms