RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
TSKU-203ENST00000527881 TRAV21A0A0B4J279 112 aa9.47□□□□□ -0.89
TSKU-203ENST00000527881 H7C423 109 aa9.47□□□□□ -0.89
TSKU-203ENST00000527881 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.89
TSKU-203ENST00000527881 UBE2E1P51965 193 aa9.46□□□□□ -0.89
TSKU-203ENST00000527881 KAAG1Q9UBP8 84 aa9.46□□□□□ -0.89
TSKU-203ENST00000527881 ICOSQ9Y6W8 199 aa9.46□□□□□ -0.89
TSKU-203ENST00000527881 SMG1Q96Q15 3661 aaKnown RBP9.46□□□□□ -0.9
TSKU-203ENST00000527881 LINC01587Q99440 93 aa9.46□□□□□ -0.9
TSKU-203ENST00000527881 SPXQ9BT56 116 aa9.46□□□□□ -0.9
TSKU-203ENST00000527881 KLK5Q9Y337 293 aaPredicted RBP9.46□□□□□ -0.9
TSKU-203ENST00000527881 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.9
TSKU-203ENST00000527881 IGHV1-69DA0A0B4J2H0 117 aa9.45□□□□□ -0.9
TSKU-203ENST00000527881 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
TSKU-203ENST00000527881 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
TSKU-203ENST00000527881 VCYO14598 125 aa9.45□□□□□ -0.9
TSKU-203ENST00000527881 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
TSKU-203ENST00000527881 JPT2Q9H910 190 aa9.45□□□□□ -0.9
TSKU-203ENST00000527881 APC2O95996 2303 aa9.45□□□□□ -0.9
TSKU-203ENST00000527881 NPFFO15130 113 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 Q6ZSV7 163 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 EEF1AKMT3Q96AZ1 226 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 LEPROTO15243 131 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
TSKU-203ENST00000527881 TNRC18O15417 2968 aaPredicted RBP9.44□□□□□ -0.9
TSKU-203ENST00000527881 HERVK_113P63121 156 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 LINC00527Q9UJ94 153 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 ZNF580Q9UK33 172 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 SPTBN2O15020 2390 aa9.44□□□□□ -0.9
TSKU-203ENST00000527881 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 C9orf47Q6ZRZ4 202 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 H3BT86 120 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 NDUFA7O95182 113 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 ZNF876PQ49A33 203 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 NRGNQ92686 78 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 DUX5Q96PT3 197 aa9.43□□□□□ -0.9
TSKU-203ENST00000527881 AMELXQ99217 191 aa9.42□□□□□ -0.9
TSKU-203ENST00000527881 EP300Q09472 2414 aaPredicted RBP9.42□□□□□ -0.9
TSKU-203ENST00000527881 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
TSKU-203ENST00000527881 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
TSKU-203ENST00000527881 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
TSKU-203ENST00000527881 ADGRG4Q8IZF6 3080 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 F6UB75 175 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 SUMO4Q6EEV6 95 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 LY6LH3BQJ8 138 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 NPBQ8NG41 125 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
TSKU-203ENST00000527881 TRAV41A0A0B4J266 112 aa9.4□□□□□ -0.9
TSKU-203ENST00000527881 J3KT08 172 aa9.4□□□□□ -0.9
TSKU-203ENST00000527881 TIMM21Q9BVV7 248 aa9.4□□□□□ -0.9
TSKU-203ENST00000527881 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
TSKU-203ENST00000527881 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
TSKU-203ENST00000527881 LY6HO94772 140 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 KLRB1Q12918 225 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 CSMD1Q96PZ7 3565 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 ZNF883P0CG24 379 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 FAM19A5Q7Z5A7 132 aaPredicted RBP9.39□□□□□ -0.91
TSKU-203ENST00000527881 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 MGAQ8IWI9 3026 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 TRBV7-7A0A0K0K1E9 115 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 G3V318 75 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 UQCRQO14949 82 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 RS1O15537 224 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
TSKU-203ENST00000527881 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 E7EQL1 145 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 ZFAND2AQ8N6M9 145 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 DAND5Q8N907 189 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 ACACAQ13085 2346 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 A0A0U1RRA0 63 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 I3L3M4 83 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 CDX4O14627 284 aaPredicted RBP9.38□□□□□ -0.91
TSKU-203ENST00000527881 RNASE13Q5GAN3 156 aaKnown RBP9.38□□□□□ -0.91
TSKU-203ENST00000527881 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 IGHV7-81A0A0B4J1V7 117 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 CLPSL1A2RUU4 121 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 IGHV3-30-3P0DP02 117 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 C9orf139Q6ZV77 190 aa9.38□□□□□ -0.91
TSKU-203ENST00000527881 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
TSKU-203ENST00000527881 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
TSKU-203ENST00000527881 TECTAO75443 2155 aa9.37□□□□□ -0.91
TSKU-203ENST00000527881 RNASE3P12724 160 aaKnown RBP9.37□□□□□ -0.91
TSKU-203ENST00000527881 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
TSKU-203ENST00000527881 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
TSKU-203ENST00000527881 SPTA1P02549 2419 aa9.36□□□□□ -0.91
TSKU-203ENST00000527881 LST1O00453 97 aa9.36□□□□□ -0.91
TSKU-203ENST00000527881 ATP6V0E1O15342 81 aa9.36□□□□□ -0.91
TSKU-203ENST00000527881 CD28P10747 220 aa9.36□□□□□ -0.91
TSKU-203ENST00000527881 VMO1Q7Z5L0 202 aa9.36□□□□□ -0.91
TSKU-203ENST00000527881 NBASA2RRP1 2371 aa9.36□□□□□ -0.91
TSKU-203ENST00000527881 PIEZO2Q9H5I5 2752 aa9.36□□□□□ -0.91
TSKU-203ENST00000527881 ADAMTSL4-AS1Q5T5F5 129 aa9.35□□□□□ -0.91
TSKU-203ENST00000527881 PTPRZ1P23471 2315 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms