RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 H3BRM9 83 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 IGKV3-20P01619 116 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 SPINK13Q1W4C9 94 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 Q8N1Y9 231 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 CHTOPQ9Y3Y2 248 aaKnown RBP11.38□□□□□ -0.59
USH1C-207ENST00000527720 MXRA5Q9NR99 2828 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 A8MTW9 85 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 VCYO14598 125 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 JPT2Q9H910 190 aa11.38□□□□□ -0.59
USH1C-207ENST00000527720 TRGV11A0A075B6L2 103 aa11.37□□□□□ -0.59
USH1C-207ENST00000527720 SLURP1P55000 103 aa11.37□□□□□ -0.59
USH1C-207ENST00000527720 MDFICQ9P1T7 246 aa11.37□□□□□ -0.59
USH1C-207ENST00000527720 CYSLTR1Q9Y271 337 aa11.37□□□□□ -0.59
USH1C-207ENST00000527720 BAALCQ8WXS3 180 aa11.37□□□□□ -0.59
USH1C-207ENST00000527720 KIR2DL4Q99706 377 aa11.37□□□□□ -0.59
USH1C-207ENST00000527720 CREBBPQ92793 2442 aa11.37□□□□□ -0.59
USH1C-207ENST00000527720 NAV2Q8IVL1 2488 aa11.36□□□□□ -0.59
USH1C-207ENST00000527720 A0A087WWL8 130 aa11.36□□□□□ -0.59
USH1C-207ENST00000527720 F5H697 171 aa11.36□□□□□ -0.59
USH1C-207ENST00000527720 CENPEQ02224 2701 aa11.36□□□□□ -0.59
USH1C-207ENST00000527720 TRBV25-1A0A075B6N4 114 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 TRBV27A0A0K0K1C4 114 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 OR11H1Q8NG94 326 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 OR4C5Q8NGB2 326 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 CHAC1Q9BUX1 264 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 TEX15Q9BXT5 2789 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 C18orf65Q6ZTR6 163 aa11.35□□□□□ -0.59
USH1C-207ENST00000527720 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
USH1C-207ENST00000527720 DEFB136Q30KP8 78 aa11.34□□□□□ -0.59
USH1C-207ENST00000527720 SDHAF1A6NFY7 115 aa11.34□□□□□ -0.59
USH1C-207ENST00000527720 CRYGDP07320 174 aa11.34□□□□□ -0.59
USH1C-207ENST00000527720 RIPPLY3P57055 190 aa11.34□□□□□ -0.59
USH1C-207ENST00000527720 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
USH1C-207ENST00000527720 ZNF256Q9Y2P7 627 aaPredicted RBP11.34□□□□□ -0.59
USH1C-207ENST00000527720 TRAV8-6A0A0B4J262 113 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 TAL2Q16559 108 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 TMEM141Q96I45 108 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 SORL1Q92673 2214 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 M0QY20 66 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 DEFB131AP59861 70 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 FAM74A4Q5TZK3 123 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
USH1C-207ENST00000527720 JMJD8Q96S16 334 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 TIMM17AQ99595 171 aa11.33□□□□□ -0.6
USH1C-207ENST00000527720 ABCA12Q86UK0 2595 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 H3BMM0 161 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 ZNF56Q15929 161 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 TP53TG1Q9Y2A0 90 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 K7EP13 123 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 ZNF876PQ49A33 203 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 TM2D2Q9BX73 214 aa11.32□□□□□ -0.6
USH1C-207ENST00000527720 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
USH1C-207ENST00000527720 OR11H12B2RN74 326 aa11.31□□□□□ -0.6
USH1C-207ENST00000527720 OR11H2Q8NH07 326 aa11.31□□□□□ -0.6
USH1C-207ENST00000527720 EDA2RQ9HAV5 297 aa11.31□□□□□ -0.6
USH1C-207ENST00000527720 RHOHQ15669 191 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 TMEM61Q8N0U2 210 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 CEND1Q8N111 149 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 MAPKAPK5-AS1Q8N8E1 139 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 E9PLD3 99 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 GCSHP23434 173 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 PMVKQ15126 192 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 NSUN5P1Q3KNT7 163 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 KHDC1LQ5JSQ8 128 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 PIK3CD-AS1Q5SR53 167 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
USH1C-207ENST00000527720 Q6ZSV7 163 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 DYNLRB2Q8TF09 96 aa11.3□□□□□ -0.6
USH1C-207ENST00000527720 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
USH1C-207ENST00000527720 SPAG8Q99932 426 aaPredicted RBP11.3□□□□□ -0.6
USH1C-207ENST00000527720 APCP25054 2843 aa11.29□□□□□ -0.6
USH1C-207ENST00000527720 TSHBP01222 138 aa11.29□□□□□ -0.6
USH1C-207ENST00000527720 RBMY1A1P0DJD3 496 aaKnown RBP11.29□□□□□ -0.6
USH1C-207ENST00000527720 RBMY1CP0DJD4 496 aa11.29□□□□□ -0.6
USH1C-207ENST00000527720 RBMY1FQ15415 496 aaKnown RBP11.29□□□□□ -0.6
USH1C-207ENST00000527720 GTF2H5Q6ZYL4 71 aa11.29□□□□□ -0.6
USH1C-207ENST00000527720 PTH2Q96A98 100 aa11.29□□□□□ -0.6
USH1C-207ENST00000527720 MYMXA0A1B0GTQ4 84 aa11.28□□□□□ -0.6
USH1C-207ENST00000527720 FXYD2P54710 66 aa11.28□□□□□ -0.6
USH1C-207ENST00000527720 DEFB114Q30KQ6 69 aa11.28□□□□□ -0.6
USH1C-207ENST00000527720 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
USH1C-207ENST00000527720 DNAJC9-AS1A6NH13 148 aa11.28□□□□□ -0.6
USH1C-207ENST00000527720 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
USH1C-207ENST00000527720 LINC00467Q9BRT7 94 aa11.28□□□□□ -0.6
USH1C-207ENST00000527720 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
USH1C-207ENST00000527720 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
USH1C-207ENST00000527720 GAGE10A6NGK3 116 aa11.27□□□□□ -0.61
USH1C-207ENST00000527720 H3BUT2 72 aa11.27□□□□□ -0.61
USH1C-207ENST00000527720 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
USH1C-207ENST00000527720 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
USH1C-207ENST00000527720 I3L3M4 83 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms