RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 DAZ2Q13117 558 aaKnown RBP5.65□□□□□ -1.5
CTNND1-216ENST00000527467 DAZ4Q86SG3 579 aaKnown RBP5.65□□□□□ -1.5
CTNND1-216ENST00000527467 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 NPBQ8NG41 125 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 KIR2DL5BQ8NHK3 375 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 DAZ3Q9NR90 486 aaKnown RBP5.65□□□□□ -1.5
CTNND1-216ENST00000527467 CHD5Q8TDI0 1954 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 IGLV3-9A0A075B6K5 115 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 C11orf86A6NJI1 115 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 GATA4P43694 442 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 NOP10Q9NPE3 64 aaKnown RBP5.65□□□□□ -1.5
CTNND1-216ENST00000527467 NDUFA4L2Q9NRX3 87 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 TMEM14BQ9NUH8 114 aa5.65□□□□□ -1.5
CTNND1-216ENST00000527467 A0A0J9YWU9 116 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 ATP6V0E1O15342 81 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV4-38-2P0DP08 117 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 RNF138Q8WVD3 245 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 IGKV1-27A0A075B6S5 117 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 EFNA2O43921 213 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 IGKV1-16P04430 117 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 LINC00694P0DN24 101 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 PIK3CD-AS1Q5SR53 167 aa5.65□□□□□ -1.51
CTNND1-216ENST00000527467 CADP27708 2225 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 LMO1P25800 156 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 ZFAND3Q9H8U3 227 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 GPHB5Q86YW7 130 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 Q8NA96 180 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 FXYD5Q96DB9 178 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 WFDC10AQ9H1F0 79 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 PCNX2A6NKB5 2137 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 GREB1Q4ZG55 1949 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 SAA4P35542 130 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 C9orf85Q96MD7 179 aa5.64□□□□□ -1.51
CTNND1-216ENST00000527467 ARHGEF17Q96PE2 2063 aaPredicted RBP5.63□□□□□ -1.51
CTNND1-216ENST00000527467 ACACBO00763 2458 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV1-58A0A0C4DH39 117 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 K7EQD1 137 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 GNRH2O43555 120 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 CCL18P55774 89 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 TTTY13Q9BZ97 58 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 TDRD6O60522 2096 aaKnown RBP5.63□□□□□ -1.51
CTNND1-216ENST00000527467 CTSGP08311 255 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 TDRG1Q3Y452 100 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 ARTNQ5T4W7 220 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 LINC00173Q6ZV60 143 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 DOCK8Q8NF50 2099 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV7-4-1A0A0J9YVY3 117 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 CLUHP3Q96NS8 147 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 TRBV7-3A0A075B6L6 115 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 K7EN84 100 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 GYPEP15421 78 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 LINC00205P59089 165 aa5.63□□□□□ -1.51
CTNND1-216ENST00000527467 RPL39LQ96EH5 51 aaKnown RBP5.63□□□□□ -1.51
CTNND1-216ENST00000527467 MIAQ16674 131 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 LY6G6DO95868 133 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 SOSTDC1Q6X4U4 206 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 AGPAT4-IT1Q9H0P7 198 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 OTOGLQ3ZCN5 2332 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 BDP1A6H8Y1 2624 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 IGLV3-32A0A0A0MS00 114 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV3-30P01768 117 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV3-33P01772 117 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV3-30-3P0DP02 117 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV3-30-5P0DP03 117 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 MIFP14174 115 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 PSMG3-AS1Q96PY0 264 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 SPRY4Q9C004 299 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 TOMM6Q96B49 74 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 HIGD2AQ9BW72 106 aa5.62□□□□□ -1.51
CTNND1-216ENST00000527467 UBE2D2P62837 147 aa5.61□□□□□ -1.51
CTNND1-216ENST00000527467 Q6Q795 121 aa5.61□□□□□ -1.51
CTNND1-216ENST00000527467 IGKV1D-17A0A075B6S4 117 aa5.61□□□□□ -1.51
CTNND1-216ENST00000527467 CSDC2Q9Y534 153 aaKnown RBP5.61□□□□□ -1.51
CTNND1-216ENST00000527467 QRFPP83859 136 aa5.61□□□□□ -1.51
CTNND1-216ENST00000527467 BBC3Q96PG8 261 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-216ENST00000527467 SDK2Q58EX2 2172 aa5.61□□□□□ -1.51
CTNND1-216ENST00000527467 COL6A6A6NMZ7 2263 aa5.61□□□□□ -1.51
CTNND1-216ENST00000527467 GVINP1Q7Z2Y8 2422 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 ANKRD36A6QL64 1941 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 VWA8A3KMH1 1905 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV4-61A0A0C4DH41 118 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 INAFM1C9JVW0 142 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 IGLV2-23P01705 113 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 IGHV1-69P01742 117 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 WFDC13Q8IUB5 93 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 YPEL4Q96NS1 127 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 NOTCH3Q9UM47 2321 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 G3V318 75 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 C5orf24Q7Z6I8 188 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 BPESC1Q9GZL8 116 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 P0DMU3 169 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 FAM231AP0DMU4 169 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 FAM231CP0DMU5 169 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 EBI3Q14213 229 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 UFSP1Q6NVU6 142 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 C16orf74Q96GX8 76 aa5.6□□□□□ -1.51
CTNND1-216ENST00000527467 NUPR1O60356 82 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms