RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 RAB24Q969Q5 203 aa12.37□□□□□ -0.43
CAPN1-206ENST00000526966 SMDT1Q9H4I9 107 aa12.37□□□□□ -0.43
CAPN1-206ENST00000526966 GCGP01275 180 aa12.36□□□□□ -0.43
CAPN1-206ENST00000526966 TCRAP04437 139 aa12.36□□□□□ -0.43
CAPN1-206ENST00000526966 FLI1Q01543 452 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-206ENST00000526966 C5orf17Q8NAS9 161 aa12.36□□□□□ -0.43
CAPN1-206ENST00000526966 CTXND1A0A1B0GTU2 59 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 F8W036 122 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
CAPN1-206ENST00000526966 IGLV2-11P01706 119 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 STAG3L2P0CL84 134 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 STAG3L3P0CL85 134 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 ZNF726P1Q15940 193 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 PARLQ9H300 379 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 FAT3Q8TDW7 4589 aa12.35□□□□□ -0.43
CAPN1-206ENST00000526966 LECT2O14960 151 aa12.34□□□□□ -0.43
CAPN1-206ENST00000526966 ZFP2Q6ZN57 461 aa12.34□□□□□ -0.43
CAPN1-206ENST00000526966 DAZ4Q86SG3 579 aaKnown RBP12.34□□□□□ -0.43
CAPN1-206ENST00000526966 DAZ3Q9NR90 486 aaKnown RBP12.34□□□□□ -0.43
CAPN1-206ENST00000526966 PSG8Q9UQ74 426 aa12.34□□□□□ -0.43
CAPN1-206ENST00000526966 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-206ENST00000526966 FHITP49789 147 aa12.33□□□□□ -0.44
CAPN1-206ENST00000526966 SMUG1Q53HV7 270 aa12.33□□□□□ -0.44
CAPN1-206ENST00000526966 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
CAPN1-206ENST00000526966 SCXQ7RTU7 201 aa12.33□□□□□ -0.44
CAPN1-206ENST00000526966 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 K7EQM0 130 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 CXorf1O96002 111 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 KRTAP10-4P60372 401 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-206ENST00000526966 GAGE1Q13065 139 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 GAGE4Q13068 117 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 GAGE5Q13069 117 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 PEA15Q15121 130 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 GAGE13Q4V321 117 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 ATRAIDQ6UW56 229 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 MBD3L1Q8WWY6 194 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 LINC00479Q96M42 142 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 COX11Q9Y6N1 276 aa12.32□□□□□ -0.44
CAPN1-206ENST00000526966 A8MWV9 139 aa12.31□□□□□ -0.44
CAPN1-206ENST00000526966 GGTLC3B5MD39 225 aa12.31□□□□□ -0.44
CAPN1-206ENST00000526966 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
CAPN1-206ENST00000526966 FAM213BQ8TBF2 198 aa12.31□□□□□ -0.44
CAPN1-206ENST00000526966 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
CAPN1-206ENST00000526966 Q9UF83 564 aa12.31□□□□□ -0.44
CAPN1-206ENST00000526966 A0A087WWC5 75 aa12.3□□□□□ -0.44
CAPN1-206ENST00000526966 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
CAPN1-206ENST00000526966 GCHFRP30047 84 aa12.3□□□□□ -0.44
CAPN1-206ENST00000526966 LINC01620Q4KN68 170 aa12.3□□□□□ -0.44
CAPN1-206ENST00000526966 UFSP1Q6NVU6 142 aa12.3□□□□□ -0.44
CAPN1-206ENST00000526966 CYB561D1Q8N8Q1 229 aa12.3□□□□□ -0.44
CAPN1-206ENST00000526966 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
CAPN1-206ENST00000526966 IGKV3D-20A0A0C4DH25 116 aa12.29□□□□□ -0.44
CAPN1-206ENST00000526966 PRNTQ86SH4 94 aa12.29□□□□□ -0.44
CAPN1-206ENST00000526966 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
CAPN1-206ENST00000526966 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
CAPN1-206ENST00000526966 PKHD1L1Q86WI1 4243 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 FAM74A7A6NL05 159 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 SUMO1P63165 101 aaKnown RBP12.28□□□□□ -0.44
CAPN1-206ENST00000526966 FAM74A3Q4VXF1 159 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 SAPCD1Q5SSQ6 148 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 RMI2Q96E14 147 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 CHAC1Q9BUX1 264 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 SAMD10Q9BYL1 202 aa12.28□□□□□ -0.44
CAPN1-206ENST00000526966 FGF8P55075 233 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-206ENST00000526966 NIT1Q86X76 327 aa12.27□□□□□ -0.45
CAPN1-206ENST00000526966 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-206ENST00000526966 Q8N976 141 aa12.27□□□□□ -0.45
CAPN1-206ENST00000526966 JPT2Q9H910 190 aa12.27□□□□□ -0.45
CAPN1-206ENST00000526966 SMCO4Q9NRQ5 59 aa12.27□□□□□ -0.45
CAPN1-206ENST00000526966 IL36BQ9NZH7 164 aa12.27□□□□□ -0.45
CAPN1-206ENST00000526966 UBR4Q5T4S7 5183 aa12.27□□□□□ -0.45
CAPN1-206ENST00000526966 RBFOX3A6NFN3 312 aa12.26□□□□□ -0.45
CAPN1-206ENST00000526966 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
CAPN1-206ENST00000526966 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
CAPN1-206ENST00000526966 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
CAPN1-206ENST00000526966 ASIPP42127 132 aa12.25□□□□□ -0.45
CAPN1-206ENST00000526966 CIRBP-AS1Q8TBR5 109 aa12.25□□□□□ -0.45
CAPN1-206ENST00000526966 IGKV2D-24A0A075B6R9 120 aa12.24□□□□□ -0.45
CAPN1-206ENST00000526966 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
CAPN1-206ENST00000526966 RHODO00212 210 aa12.24□□□□□ -0.45
CAPN1-206ENST00000526966 OXTP01178 125 aa12.24□□□□□ -0.45
CAPN1-206ENST00000526966 SRSF3P84103 164 aaKnown RBP12.24□□□□□ -0.45
CAPN1-206ENST00000526966 RHEBQ15382 184 aa12.24□□□□□ -0.45
CAPN1-206ENST00000526966 URGCP-MRPS24S4R325 110 aa12.24□□□□□ -0.45
CAPN1-206ENST00000526966 ARL2-SNX15V9GYD0 113 aa12.24□□□□□ -0.45
CAPN1-206ENST00000526966 FABP5P3A8MUU1 101 aa12.23□□□□□ -0.45
CAPN1-206ENST00000526966 DNLZQ5SXM8 178 aa12.23□□□□□ -0.45
CAPN1-206ENST00000526966 DMRTA1Q5VZB9 504 aa12.23□□□□□ -0.45
CAPN1-206ENST00000526966 SYT8Q8NBV8 401 aa12.23□□□□□ -0.45
CAPN1-206ENST00000526966 CHCHD7Q9BUK0 85 aa12.23□□□□□ -0.45
CAPN1-206ENST00000526966 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
CAPN1-206ENST00000526966 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
CAPN1-206ENST00000526966 H3BVH4 76 aa12.22□□□□□ -0.45
CAPN1-206ENST00000526966 A0A1B0GV50 99 aa12.21□□□□□ -0.45
CAPN1-206ENST00000526966 NDUFS6O75380 124 aaKnown RBP12.21□□□□□ -0.45
CAPN1-206ENST00000526966 IGLV2-8P01709 118 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms