RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 DAZ2Q13117 558 aaKnown RBP9.09□□□□□ -0.95
SSSCA1-203ENST00000526877 PIK3CD-AS1Q5SR53 167 aa9.09□□□□□ -0.95
SSSCA1-203ENST00000526877 AP1S3Q96PC3 154 aa9.09□□□□□ -0.95
SSSCA1-203ENST00000526877 C1orf196B1AJZ1 125 aa9.08□□□□□ -0.96
SSSCA1-203ENST00000526877 TRGC2P03986 189 aa9.08□□□□□ -0.96
SSSCA1-203ENST00000526877 NDUFAF3Q9BU61 184 aa9.08□□□□□ -0.96
SSSCA1-203ENST00000526877 NOP10Q9NPE3 64 aaKnown RBP9.08□□□□□ -0.96
SSSCA1-203ENST00000526877 LYSTQ99698 3801 aa9.08□□□□□ -0.96
SSSCA1-203ENST00000526877 A0A0J9YWU9 116 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 A8MWV9 139 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 EVI2AP22794 236 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 EMP1P54849 157 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 LGALS9BQ3B8N2 356 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 RASL10AQ92737 203 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 MRPL16Q9NX20 251 aaKnown RBP9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
SSSCA1-203ENST00000526877 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
SSSCA1-203ENST00000526877 PLAC8L1A1L4L8 177 aa9.06□□□□□ -0.96
SSSCA1-203ENST00000526877 C14orf178Q8N769 122 aaPredicted RBP9.06□□□□□ -0.96
SSSCA1-203ENST00000526877 HYDINQ4G0P3 5121 aa9.06□□□□□ -0.96
SSSCA1-203ENST00000526877 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
SSSCA1-203ENST00000526877 IGHV4-28A0A0C4DH34 117 aa9.05□□□□□ -0.96
SSSCA1-203ENST00000526877 RAB5BP61020 215 aa9.05□□□□□ -0.96
SSSCA1-203ENST00000526877 SLAQ13239 276 aa9.05□□□□□ -0.96
SSSCA1-203ENST00000526877 AMN1Q8IY45 258 aa9.05□□□□□ -0.96
SSSCA1-203ENST00000526877 JPT2Q9H910 190 aa9.05□□□□□ -0.96
SSSCA1-203ENST00000526877 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
SSSCA1-203ENST00000526877 MGPP08493 103 aa9.04□□□□□ -0.96
SSSCA1-203ENST00000526877 RAB4AP20338 218 aa9.04□□□□□ -0.96
SSSCA1-203ENST00000526877 KIAA1644Q3SXP7 199 aa9.04□□□□□ -0.96
SSSCA1-203ENST00000526877 Q6ZTI0 123 aa9.04□□□□□ -0.96
SSSCA1-203ENST00000526877 Q8NAQ8 132 aa9.04□□□□□ -0.96
SSSCA1-203ENST00000526877 TRGV2A0A075B6R0 118 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 A0A087WWL8 130 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 GAGE12BA1L429 117 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 F5H697 171 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 RHODO00212 210 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 RS1O15537 224 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 GAGE7O76087 117 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 PPBPP02775 128 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 GAGE12FP0CL80 117 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 GAGE12GP0CL81 117 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 GAGE12IP0CL82 117 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 CKS2P33552 79 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 MRPL51Q4U2R6 128 aaKnown RBP9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 FAM74A4Q5TZK3 123 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 OR4C5Q8NGB2 326 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 RNF185Q96GF1 192 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 KIF25-AS1Q9Y6Z4 181 aa9.03□□□□□ -0.96
SSSCA1-203ENST00000526877 TRAV4A0A0B4J268 109 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 TEX48A0A1B0GUV7 120 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 PHOX2AO14813 284 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 CIDEAO60543 219 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 CRYGDP07320 174 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 CFAP126Q5VTH2 177 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 MRAP2Q96G30 205 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 SAMD10Q9BYL1 202 aa9.02□□□□□ -0.97
SSSCA1-203ENST00000526877 EPPK1P58107 5090 aaKnown RBP9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 NACAE9PAV3 2078 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 D6R8Y8 96 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 DEFB4AO15263 64 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 SPART-AS1P0CW21 52 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 ZNF56Q15929 161 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 FAM222AQ5U5X8 452 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 ZFP2Q6ZN57 461 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 ORMDL3Q8N138 153 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 DKK2Q9UBU2 259 aa9.01□□□□□ -0.97
SSSCA1-203ENST00000526877 DEFB130BP0DP73 79 aa9□□□□□ -0.97
SSSCA1-203ENST00000526877 DEFB130AP0DP74 79 aa9□□□□□ -0.97
SSSCA1-203ENST00000526877 SRIP30626 198 aa9□□□□□ -0.97
SSSCA1-203ENST00000526877 LINC00315P59091 139 aa9□□□□□ -0.97
SSSCA1-203ENST00000526877 CEMP1Q6PRD7 247 aaPredicted RBP9□□□□□ -0.97
SSSCA1-203ENST00000526877 LINC00612Q8N6U2 182 aa9□□□□□ -0.97
SSSCA1-203ENST00000526877 POM121L12Q8N7R1 296 aa9□□□□□ -0.97
SSSCA1-203ENST00000526877 PRELID3AQ96N28 172 aa9□□□□□ -0.97
SSSCA1-203ENST00000526877 ALKBH7Q9BT30 221 aaPredicted RBP9□□□□□ -0.97
SSSCA1-203ENST00000526877 C11orf68Q9H3H3 251 aaKnown RBP9□□□□□ -0.97
SSSCA1-203ENST00000526877 TMA7Q9Y2S6 64 aaKnown RBP9□□□□□ -0.97
SSSCA1-203ENST00000526877 IGHV3-73A0A0B4J1V6 119 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 SMKR1H3BMG3 65 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 H7C1H1 209 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BKO60814 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 PPP1R17O96001 155 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BJP06899 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BOP23527 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BBP33778 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BDP58876 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 DAD1P61803 113 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BCP62807 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST2H2BEQ16778 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 UFSP1Q6NVU6 142 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BHQ93079 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 C18orf15Q96N68 181 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BNQ99877 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 HIST1H2BMQ99879 126 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 LAMTOR2Q9Y2Q5 125 aa8.99□□□□□ -0.97
SSSCA1-203ENST00000526877 TRAV26-2A0A0B4J265 109 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms