RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 AAED1Q7RTV5 226 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 TEN1Q86WV5 123 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 ZNF101Q8IZC7 436 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 CIRBP-AS1Q8TBR5 109 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 ANAPC11Q9NYG5 84 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 ZNF443Q9Y2A4 671 aaPredicted RBP3.07□□□□□ -1.92
CD44-220ENST00000525688 ITPR3Q14573 2671 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 DSCAMO60469 2012 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 MED12LQ86YW9 2145 aa3.07□□□□□ -1.92
CD44-220ENST00000525688 PNMA8CA0A1B0GUJ8 204 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 PYYP10082 97 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 COX6B1P14854 86 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 HLA-DMBP28068 263 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
CD44-220ENST00000525688 GNGT1P63211 74 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 VPS13CQ709C8 3753 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 ADM2Q7Z4H4 148 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 HIST3H2BBQ8N257 126 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 CCDC168Q8NDH2 2452 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 OR10P1Q8NGE3 313 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 ZNF563Q8TA94 476 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 PRELID3AQ96N28 172 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 HIST1H2BLQ99880 126 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 UPK3BQ9BT76 320 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 NPCDR1Q9BY65 106 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 OSTCQ9NRP0 149 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 COMMD3Q9UBI1 195 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 HSPE1-MOB4S4R3N1 261 aa3.06□□□□□ -1.92
CD44-220ENST00000525688 CACNA1DQ01668 2161 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 TRGV10A0A0A0MS01 117 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 IGHV1-3A0A0C4DH29 117 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 A8MWP4 228 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 IGHV1-46P01743 117 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 SYCNQ0VAF6 134 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 PYY3Q5JQD4 70 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 C7orf65Q6ZTY9 151 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 MIR17HGQ75NE6 70 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 ARPINQ7Z6K5 226 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 TTC9CQ8N5M4 171 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 CNEP1R1Q8N9A8 125 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 WFDC6Q9BQY6 131 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 TTTY13Q9BZ97 58 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 GABARAPL1Q9H0R8 117 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 TXNL4BQ9NX01 149 aaKnown RBP3.05□□□□□ -1.92
CD44-220ENST00000525688 EPDR1Q9UM22 224 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 ABCA4P78363 2273 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 HIVEP1P15822 2718 aa3.05□□□□□ -1.92
CD44-220ENST00000525688 CREBBPQ92793 2442 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 IGKV1D-42A0A075B6H8 117 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 TRAV12-2A0A075B6T6 113 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 IGHV3-15A0A0B4J1V0 119 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 IGHV3-64DA0A0J9YX35 117 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 A0A1B0GWA3 101 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 TMEM223A0PJW6 202 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 M0R129 80 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 IGKV1D-33P01593 117 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 IGKV1-33P01594 117 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 IGHV3-7P01780 117 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 CD2P06729 351 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 SPINK8P0C7L1 97 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 TRGC1P0CF51 173 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 SNRPD3P62318 126 aaKnown RBP3.04□□□□□ -1.92
CD44-220ENST00000525688 AKR1C1Q04828 323 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 KISS1Q15726 138 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 C10orf91Q5T1B1 145 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 BPIFA4PQ86YQ2 179 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 OR4B1Q8NGF8 309 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
CD44-220ENST00000525688 DIRC1Q969H9 104 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 AKAP6Q13023 2319 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 ZANQ9Y493 2812 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 FREM1Q5H8C1 2179 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 MPDZO75970 2070 aa3.04□□□□□ -1.92
CD44-220ENST00000525688 NIPBLQ6KC79 2804 aaeCLIP3.03□□□□□ -1.92
CD44-220ENST00000525688 A6NDX4 124 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 C3orf84H3BNL1 204 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 LECT2O14960 151 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 SYNGR2O43760 224 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 HRASP01112 189 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 HBDP02042 147 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 FXYD7P58549 80 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 EIF5AL1Q6IS14 154 aaKnown RBP3.03□□□□□ -1.92
CD44-220ENST00000525688 SH2D6Q7Z4S9 175 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 SLC35E3Q7Z769 313 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 KCNRGQ8N5I3 272 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 SIGLECL1Q8N7X8 197 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 Q8N9W7 124 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 BPIFB6Q8NFQ5 453 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 LINC01560Q8TB33 94 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 NAA60Q9H7X0 242 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 ZNRD1Q9P1U0 126 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 NF1P21359 2839 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 C2CD3Q4AC94 2353 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 ROS1P08922 2347 aa3.03□□□□□ -1.92
CD44-220ENST00000525688 PRR14LQ5THK1 2151 aa3.02□□□□□ -1.93
CD44-220ENST00000525688 ZNF469Q96JG9 3925 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms