RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 DEFB132Q7Z7B7 95 aa0.85□□□□□ -2.27
COPB1-203ENST00000525214 SBSPONQ8IVN8 264 aa0.85□□□□□ -2.27
COPB1-203ENST00000525214 AMELYQ99218 206 aa0.85□□□□□ -2.27
COPB1-203ENST00000525214 SEC11CQ9BY50 192 aa0.85□□□□□ -2.27
COPB1-203ENST00000525214 PEAK1Q9H792 1746 aa0.85□□□□□ -2.27
COPB1-203ENST00000525214 GNG8Q9UK08 70 aa0.85□□□□□ -2.27
COPB1-203ENST00000525214 CFTRP13569 1480 aa0.85□□□□□ -2.27
COPB1-203ENST00000525214 TEX49A0A1B0GTD5 131 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 F6UZH7 168 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 NCR3O14931 201 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 SNCGO76070 127 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 IFNA17P01571 189 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 TFF1P04155 84 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 CCKP06307 115 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 SLC25A6P12236 298 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 S100A1P23297 94 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 S100PP25815 95 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 FXYD4P59646 89 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 RPL7L1Q6DKI1 246 aaKnown RBP0.84□□□□□ -2.27
COPB1-203ENST00000525214 XAF1Q6GPH4 301 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 SLC48A1Q6P1K1 146 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 Q6ZQY7 126 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 PPP1R1CQ8WVI7 109 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 PP6455Q8WZ26 134 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 TMEM141Q96I45 108 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 AGPAT4-IT1Q9H0P7 198 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 SCN3BQ9NY72 215 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 NDUFA12Q9UI09 145 aa0.84□□□□□ -2.27
COPB1-203ENST00000525214 CDK12Q9NYV4 1490 aaPredicted RBP0.84□□□□□ -2.28
COPB1-203ENST00000525214 MBD5Q9P267 1494 aa0.84□□□□□ -2.28
COPB1-203ENST00000525214 DLG5Q8TDM6 1919 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 SPAARA0A1B0GVQ0 90 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 APOC4-APOC2K7ER74 178 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 CORTO00230 105 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 APOC2P02655 101 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 CBLN1P23435 193 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 Q56UQ5 140 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 Q6AWC8 147 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 RPRMQ9NS64 109 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 SERP1Q9Y6X1 66 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 ZNF518AQ6AHZ1 1483 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 ROS1P08922 2347 aa0.83□□□□□ -2.28
COPB1-203ENST00000525214 KTN1Q86UP2 1357 aaKnown RBP0.83□□□□□ -2.28
COPB1-203ENST00000525214 KDM6BO15054 1643 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 PHRF1Q9P1Y6 1649 aaKnown RBP0.82□□□□□ -2.28
COPB1-203ENST00000525214 DOCK11Q5JSL3 2073 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 CTTNBP2Q8WZ74 1663 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 A2ML1A8K2U0 1454 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 MCRIP1C9JLW8 97 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 SNAPC5O75971 98 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 TNFP01375 233 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 GNG4P50150 75 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 CAV3P56539 151 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 FXYD3Q14802 87 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 C9orf116Q5BN46 136 aaPredicted RBP0.82□□□□□ -2.28
COPB1-203ENST00000525214 C10orf99Q6UWK7 81 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 Q6ZS92 163 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 CYP2G1PQ6ZSU1 146 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 C4orf33Q8N1A6 199 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 TCEAL7Q9BRU2 100 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 PI4KAP42356 2102 aa0.82□□□□□ -2.28
COPB1-203ENST00000525214 E9PCH4 1651 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 ZNF142P52746 1687 aaPredicted RBP0.81□□□□□ -2.28
COPB1-203ENST00000525214 BLMP54132 1417 aaPredicted RBP0.81□□□□□ -2.28
COPB1-203ENST00000525214 PTPRMP28827 1452 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 LAMB1P07942 1786 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 DLEC1Q9Y238 1755 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.81□□□□□ -2.28
COPB1-203ENST00000525214 TRBV30A0A0K0K1B3 111 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 LOC101927531A0A1B0GV80 90 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 TCRBV3S1A0A5B6 114 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 ATP6V1G2-DDX39BF2Z307 99 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 EFNA4P52798 201 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 TPPP2P59282 170 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 TSKUQ8WUA8 353 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 IFI27L1Q96BM0 104 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 PPP3R2Q96LZ3 170 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 C12orf57Q99622 126 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 COA4Q9NYJ1 87 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 BET1LQ9NYM9 111 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 IER3IP1Q9Y5U9 82 aa0.81□□□□□ -2.28
COPB1-203ENST00000525214 MYOM2P54296 1465 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 IFT140Q96RY7 1462 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 MYO7AQ13402 2215 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 TRAV12-3A0A0B4J271 114 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 NBDYA0A0U1RRE5 68 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 C20orf202A1L168 122 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 UBE2G1P62253 170 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 PPP3R1P63098 170 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 KLKP1Q107X0 134 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 S100A7L2Q5SY68 101 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 C8orf59Q8N0T1 100 aaPredicted RBP0.8□□□□□ -2.28
COPB1-203ENST00000525214 LSM10Q969L4 123 aaKnown RBP0.8□□□□□ -2.28
COPB1-203ENST00000525214 CCL19Q99731 98 aa0.8□□□□□ -2.28
COPB1-203ENST00000525214 MAPKBP1O60336 1514 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 F5P12259 2224 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 TRBV10-3A0A0K0K1G6 114 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 A0A1W2PPM0 123 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 RBAKDNA6NC62 111 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 FXYD6P3P58550 94 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms