RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DCDP81605 110 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 ZNF117Q03924 483 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 ATP6V0E2Q8NHE4 81 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 POP5Q969H6 163 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 DSCR8Q96T75 97 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 NPVFQ9HCQ7 196 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 NYNRINQ9P2P1 1898 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 FAM215AQ9Y5M1 114 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 FASNP49327 2511 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 ASXL3Q9C0F0 2248 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 PCNX2A6NKB5 2137 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 PKD1L2Q7Z442 2459 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 ZNF292O60281 2723 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 MYO18AQ92614 2054 aaKnown RBP2.88□□□□□ -1.95
CD44-213ENST00000525209 TRBV10-2A0A0K0K1G8 114 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 H3BPC8 53 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 NDUFB6O95139 128 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 IGLV1-51P01701 117 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 IGHV3-53P01767 116 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 ZNF22P17026 224 aaPredicted RBP2.88□□□□□ -1.95
CD44-213ENST00000525209 COL8A2P25067 703 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 IQCJQ1A5X6 159 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 KRTAP24-1Q3LI83 254 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 SPRNQ5BIV9 151 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 Q8IYB0 196 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 OR2T35Q8NGX2 323 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 C10orf105Q8TEF2 133 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 LINC00052Q96N35 136 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 ASF1BQ9NVP2 202 aa2.88□□□□□ -1.95
CD44-213ENST00000525209 KMT2BQ9UMN6 2715 aaPredicted RBP2.88□□□□□ -1.95
CD44-213ENST00000525209 ANKRD11Q6UB99 2663 aaPredicted RBP2.87□□□□□ -1.95
CD44-213ENST00000525209 HEATR5AQ86XA9 2040 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 F5P12259 2224 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 RBAKDNA6NC62 111 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 H3BQ15 152 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 SSSCA1O60232 199 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 MRPS14O60783 128 aaKnown RBP2.87□□□□□ -1.95
CD44-213ENST00000525209 COX7CP15954 63 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 ESRGQ1W209 222 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 FAM27BQ5VT28 67 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 LYZL1Q6UWQ5 148 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 Q8N814 137 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 CYB561D1Q8N8Q1 229 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 TMEM242Q9NWH2 141 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 HHLA3Q9XRX5 114 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 TIMM9Q9Y5J7 89 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 MYLKQ15746 1914 aa2.87□□□□□ -1.95
CD44-213ENST00000525209 DNAH14Q0VDD8 3507 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 DOCK9Q9BZ29 2069 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 DMDP11532 3685 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 GPR179Q6PRD1 2367 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 USP24Q9UPU5 2620 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 IGLV3-12A0A075B6K2 115 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 C17orf112F2Z3M2 114 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 H7C2G1 150 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 J3QLW9 94 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 SNCGO76070 127 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 DEFA4P12838 97 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 ZNF14P17017 642 aaPredicted RBP2.86□□□□□ -1.95
CD44-213ENST00000525209 ROMO1P60602 79 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 PEA15Q15121 130 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 C12orf73Q69YU5 71 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 UNQ5815/PRO19632Q6UWF5 114 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 Q6ZQT0 140 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 ZNF720Q7Z2F6 126 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 SBSPONQ8IVN8 264 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 TSKUQ8WUA8 353 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 C10orf82Q8WW14 230 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 SLC50A1Q9BRV3 221 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 DPH3P1Q9H4G8 78 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 CHD6Q8TD26 2715 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 SCN1AP35498 2009 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 TRPM6Q9BX84 2022 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 BPTFQ12830 3046 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 MYO16Q9Y6X6 1858 aa2.86□□□□□ -1.95
CD44-213ENST00000525209 ACACAQ13085 2346 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 NUP214P35658 2090 aaPredicted RBP2.85□□□□□ -1.95
CD44-213ENST00000525209 IGKV2D-30A0A075B6S6 120 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 IGKV2D-26A0A0A0MRZ7 120 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 IGHV1-24A0A0C4DH33 117 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 B4DSR2 109 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 K7EP34 96 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 PROSCO94903 275 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 IL5P05113 134 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 Q6ZR54 194 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 Q8N8P6 123 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 UBALD1Q8TB05 177 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 SPTSSAQ969W0 71 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 CST11Q9H112 138 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 FRYQ5TBA9 3013 aa2.85□□□□□ -1.95
CD44-213ENST00000525209 AGRNO00468 2067 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 TRAV14DV4A0A0A6YYC5 116 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 CGAP01215 116 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 ASIPP42127 132 aa2.84□□□□□ -1.95
CD44-213ENST00000525209 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms