RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 MAP1LC3AQ9H492 121 aa5.2□□□□□ -1.58
VPS11-201ENST00000524454 DPH3P1Q9H4G8 78 aa5.2□□□□□ -1.58
VPS11-201ENST00000524454 MAP6D1Q9H9H5 199 aa5.2□□□□□ -1.58
VPS11-201ENST00000524454 EDA2RQ9HAV5 297 aa5.2□□□□□ -1.58
VPS11-201ENST00000524454 NAGKQ9UJ70 344 aa5.2□□□□□ -1.58
VPS11-201ENST00000524454 HSPB8Q9UJY1 196 aa5.2□□□□□ -1.58
VPS11-201ENST00000524454 IGKV3-7A0A075B6H7 116 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 IGHV1OR15-1A0A075B7D0 117 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 IGHV1-24A0A0C4DH33 117 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 H3BVH4 76 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 ZNF705DP0CH99 300 aaPredicted RBP5.19□□□□□ -1.58
VPS11-201ENST00000524454 ZNF705BP0CI00 300 aaPredicted RBP5.19□□□□□ -1.58
VPS11-201ENST00000524454 RNASE3P12724 160 aaKnown RBP5.19□□□□□ -1.58
VPS11-201ENST00000524454 NUTF2P61970 127 aaKnown RBP5.19□□□□□ -1.58
VPS11-201ENST00000524454 CD300EQ496F6 205 aaPredicted RBP5.19□□□□□ -1.58
VPS11-201ENST00000524454 RNASEKQ6P5S7 137 aaKnown RBP5.19□□□□□ -1.58
VPS11-201ENST00000524454 FA2HQ7L5A8 372 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 PRSS3P2Q8NHM4 247 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 URB1-AS1Q96HZ7 61 aa5.19□□□□□ -1.58
VPS11-201ENST00000524454 IGHV3-16A0A0C4DH30 117 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 KIR2DL5BA0A0G2JN68 375 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 KIR2DL5BA0A0G2JPC4 375 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 KRTAP9-6A0A140TA67 174 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 OR11H12B2RN74 326 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 TCAPO15273 167 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 LEPROTL1O95214 131 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 INSP01308 110 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 BTF3P20290 206 aaKnown RBP5.18□□□□□ -1.58
VPS11-201ENST00000524454 G0S2P27469 103 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 TFPI2P48307 235 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 DEFB131AP59861 70 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 ODF3L2Q3SX64 289 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 PET117Q6UWS5 81 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 MRPL52Q86TS9 123 aaKnown RBP5.18□□□□□ -1.58
VPS11-201ENST00000524454 KIR2DL5AQ8N109 375 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 B9D2Q9BPU9 175 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 TMEM70Q9BUB7 260 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 DNAH9Q9NYC9 4486 aa5.18□□□□□ -1.58
VPS11-201ENST00000524454 TRAV12-3A0A0B4J271 114 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 TRBV6-5A0A0K0K1A5 114 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 TNFRSF6BO95407 300 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 SCGB1D1O95968 90 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 HBDP02042 147 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 C3orf79P0CE67 100 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 SMIM17P0DL12 118 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 TRPT1Q86TN4 253 aaKnown RBP5.17□□□□□ -1.58
VPS11-201ENST00000524454 Q8N8P6 123 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 NRACQ8N912 160 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 SPXQ9BT56 116 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 C1QTNF4Q9BXJ3 329 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 MAP1LC3CQ9BXW4 147 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 WFDC10AQ9H1F0 79 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 MSRB1Q9NZV6 116 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 ZMAT5Q9UDW3 170 aaKnown RBP5.17□□□□□ -1.58
VPS11-201ENST00000524454 KIF25-AS1Q9Y6Z4 181 aa5.17□□□□□ -1.58
VPS11-201ENST00000524454 NPYP01303 97 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 CD7P09564 240 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 EVI2AP22794 236 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 DEFB1P60022 68 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 ZNF415Q09FC8 603 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 SPINK13Q1W4C9 94 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 ORMDL2Q53FV1 153 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 MORN3Q6PF18 240 aaPredicted RBP5.16□□□□□ -1.58
VPS11-201ENST00000524454 SBSPONQ8IVN8 264 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 Q8N1Y9 231 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 COL7A1Q02388 2944 aa5.16□□□□□ -1.58
VPS11-201ENST00000524454 IGLV2-18A0A075B6J9 118 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 A8MWV9 139 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 SYS1-DBNDD2H3BUS1 97 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 H7C1H1 209 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 RHODO00212 210 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 CIDEAO60543 219 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 IGHV4-30-4P0DP06 118 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 FCER1GP30273 86 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 IFI27P40305 119 aaPredicted RBP5.15□□□□□ -1.59
VPS11-201ENST00000524454 LINC00315P59091 139 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 KRTDAPP60985 99 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 SUMO2P61956 95 aaKnown RBP5.15□□□□□ -1.59
VPS11-201ENST00000524454 MUC21Q5SSG8 566 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 LINC01545Q5VT33 79 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 STHQ8IWL8 128 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 FAM19A2Q8N3H0 131 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 Q8N976 141 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 VAMP8Q9BV40 100 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 SMIM2Q9BVW6 85 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 SORL1Q92673 2214 aa5.15□□□□□ -1.59
VPS11-201ENST00000524454 A0A096LNJ9 63 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 M0R2P5 195 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 GNRH2O43555 120 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 ATP5LO75964 103 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 PRB4P10163 310 aaPredicted RBP5.14□□□□□ -1.59
VPS11-201ENST00000524454 DDTP30046 118 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 LGALS9BQ3B8N2 356 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 LBHQ53QV2 105 aaPredicted RBP5.14□□□□□ -1.59
VPS11-201ENST00000524454 LGALS9CQ6DKI2 356 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 ZFP2Q6ZN57 461 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 Q6ZQT7 251 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 IL17DQ8TAD2 202 aa5.14□□□□□ -1.59
VPS11-201ENST00000524454 TRAV12-2A0A075B6T6 113 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms