RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SPCS2Q15005 226 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 PRR4Q16378 134 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 FAM74A4Q5TZK3 123 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 OR10G8Q8NGN5 311 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 PRSS3P2Q8NHM4 247 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 MITD1Q8WV92 249 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 KCNIP2Q9NS61 270 aa10.73□□□□□ -0.69
PVT1-220ENST00000524165 RBX1P62877 108 aa10.72□□□□□ -0.69
PVT1-220ENST00000524165 KHDC3LQ587J8 217 aa10.72□□□□□ -0.69
PVT1-220ENST00000524165 THAP6Q8TBB0 222 aa10.72□□□□□ -0.69
PVT1-220ENST00000524165 IL36BQ9NZH7 164 aa10.72□□□□□ -0.69
PVT1-220ENST00000524165 MBD2Q9UBB5 411 aa10.72□□□□□ -0.69
PVT1-220ENST00000524165 GZMBP10144 247 aa10.71□□□□□ -0.69
PVT1-220ENST00000524165 CACNG7P62955 275 aa10.71□□□□□ -0.69
PVT1-220ENST00000524165 SGK494Q96LW2 274 aa10.71□□□□□ -0.69
PVT1-220ENST00000524165 FLVCR2Q9UPI3 526 aa10.71□□□□□ -0.69
PVT1-220ENST00000524165 TRAV8-4A0A0B4J246 113 aa10.7□□□□□ -0.7
PVT1-220ENST00000524165 SERTM2A0A1B0GWG4 89 aa10.7□□□□□ -0.7
PVT1-220ENST00000524165 P01737 135 aa10.7□□□□□ -0.7
PVT1-220ENST00000524165 RPS10P46783 165 aaKnown RBP10.7□□□□□ -0.7
PVT1-220ENST00000524165 TAS2R45P59539 299 aa10.7□□□□□ -0.7
PVT1-220ENST00000524165 ZFP69Q49AA0 526 aa10.7□□□□□ -0.7
PVT1-220ENST00000524165 SMUG1Q53HV7 270 aa10.7□□□□□ -0.7
PVT1-220ENST00000524165 PYDC2Q56P42 97 aa10.7□□□□□ -0.7
PVT1-220ENST00000524165 MRPS26Q9BYN8 205 aaKnown RBP10.7□□□□□ -0.7
PVT1-220ENST00000524165 IGKV3D-20A0A0C4DH25 116 aa10.69□□□□□ -0.7
PVT1-220ENST00000524165 GNG5P63218 68 aa10.69□□□□□ -0.7
PVT1-220ENST00000524165 REG3AQ06141 175 aa10.69□□□□□ -0.7
PVT1-220ENST00000524165 SFRP2Q96HF1 295 aa10.69□□□□□ -0.7
PVT1-220ENST00000524165 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
PVT1-220ENST00000524165 LINC00474Q9P2X8 69 aa10.68□□□□□ -0.7
PVT1-220ENST00000524165 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
PVT1-220ENST00000524165 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
PVT1-220ENST00000524165 OR11H4Q8NGC9 324 aa10.67□□□□□ -0.7
PVT1-220ENST00000524165 A0A096LNI7 61 aa10.66□□□□□ -0.7
PVT1-220ENST00000524165 PSG8Q9UQ74 426 aa10.66□□□□□ -0.7
PVT1-220ENST00000524165 FAM25EA8MYX2 175 aa10.65□□□□□ -0.7
PVT1-220ENST00000524165 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.7
PVT1-220ENST00000524165 H3BVH4 76 aa10.65□□□□□ -0.7
PVT1-220ENST00000524165 DNLZQ5SXM8 178 aa10.65□□□□□ -0.7
PVT1-220ENST00000524165 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
PVT1-220ENST00000524165 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
PVT1-220ENST00000524165 OR5C1Q8NGR4 320 aa10.65□□□□□ -0.7
PVT1-220ENST00000524165 WDR61Q9GZS3 305 aaKnown RBP10.65□□□□□ -0.7
PVT1-220ENST00000524165 NAP1L6A6NFF2 107 aa10.64□□□□□ -0.71
PVT1-220ENST00000524165 K7EQM0 130 aa10.64□□□□□ -0.71
PVT1-220ENST00000524165 GAGE6Q13070 117 aa10.64□□□□□ -0.71
PVT1-220ENST00000524165 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
PVT1-220ENST00000524165 NEXN-AS1Q8NBZ9 246 aa10.64□□□□□ -0.71
PVT1-220ENST00000524165 V9GYH0 126 aa10.64□□□□□ -0.71
PVT1-220ENST00000524165 TCRAP04437 139 aa10.63□□□□□ -0.71
PVT1-220ENST00000524165 ARMS2P0C7Q2 107 aa10.63□□□□□ -0.71
PVT1-220ENST00000524165 NHLH2Q02577 135 aa10.63□□□□□ -0.71
PVT1-220ENST00000524165 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
PVT1-220ENST00000524165 SAPCD1Q5SSQ6 148 aa10.62□□□□□ -0.71
PVT1-220ENST00000524165 PQLC2Q6ZP29 291 aa10.62□□□□□ -0.71
PVT1-220ENST00000524165 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 RAB5CP51148 216 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 RAB4BP61018 213 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 IL15RAQ13261 267 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 RAB32Q13637 225 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 PRR27Q6MZM9 219 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 PRNTQ86SH4 94 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 C5orf17Q8NAS9 161 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 PKIGQ9Y2B9 76 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 PHLDA3Q9Y5J5 127 aa10.61□□□□□ -0.71
PVT1-220ENST00000524165 B4DEV8 164 aa10.6□□□□□ -0.71
PVT1-220ENST00000524165 C20orf203Q8NBC4 194 aa10.6□□□□□ -0.71
PVT1-220ENST00000524165 M0R381 172 aa10.59□□□□□ -0.71
PVT1-220ENST00000524165 EIF3GO75821 320 aaKnown RBP eCLIP10.59□□□□□ -0.71
PVT1-220ENST00000524165 DERL1Q9BUN8 251 aa10.59□□□□□ -0.71
PVT1-220ENST00000524165 IGLV1-50A0A075B6I6 118 aa10.58□□□□□ -0.72
PVT1-220ENST00000524165 TRBV6-1A0A0K0K1D8 114 aa10.58□□□□□ -0.72
PVT1-220ENST00000524165 TPT1P13693 172 aaKnown RBP10.58□□□□□ -0.72
PVT1-220ENST00000524165 IQCJQ1A5X6 159 aa10.58□□□□□ -0.72
PVT1-220ENST00000524165 ZFP82Q8N141 532 aa10.58□□□□□ -0.72
PVT1-220ENST00000524165 INO80EQ8NBZ0 244 aaPredicted RBP10.58□□□□□ -0.72
PVT1-220ENST00000524165 TRAV6A0A075B6T7 132 aa10.57□□□□□ -0.72
PVT1-220ENST00000524165 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
PVT1-220ENST00000524165 KRBOX1C9JBD0 128 aa10.57□□□□□ -0.72
PVT1-220ENST00000524165 CNPY1Q3B7I2 92 aa10.57□□□□□ -0.72
PVT1-220ENST00000524165 HIGD2BQ4VC39 106 aa10.57□□□□□ -0.72
PVT1-220ENST00000524165 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
PVT1-220ENST00000524165 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
PVT1-220ENST00000524165 ZNF56Q15929 161 aa10.56□□□□□ -0.72
PVT1-220ENST00000524165 DIRC1Q969H9 104 aa10.56□□□□□ -0.72
PVT1-220ENST00000524165 GVQW2A0A096LPI5 108 aaPredicted RBP10.55□□□□□ -0.72
PVT1-220ENST00000524165 IGHV1-24A0A0C4DH33 117 aa10.55□□□□□ -0.72
PVT1-220ENST00000524165 GRIFINA4D1Z8 144 aa10.55□□□□□ -0.72
PVT1-220ENST00000524165 BTCP35070 178 aa10.55□□□□□ -0.72
PVT1-220ENST00000524165 RAB2AP61019 212 aa10.55□□□□□ -0.72
PVT1-220ENST00000524165 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
PVT1-220ENST00000524165 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
PVT1-220ENST00000524165 EPDR1Q9UM22 224 aa10.54□□□□□ -0.72
PVT1-220ENST00000524165 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
PVT1-220ENST00000524165 H3BMQ9 156 aa10.53□□□□□ -0.72
PVT1-220ENST00000524165 MT-ND6P03923 174 aa10.53□□□□□ -0.72
PVT1-220ENST00000524165 SUN5Q8TC36 379 aa10.53□□□□□ -0.72
PVT1-220ENST00000524165 AQP10Q96PS8 301 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms