RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TMEM167BQ9NRX6 74 aa16.81■□□□□ 0.28
PVT1-219ENST00000523427 CXorf1O96002 111 aa16.8■□□□□ 0.28
PVT1-219ENST00000523427 IFNA7P01567 189 aa16.8■□□□□ 0.28
PVT1-219ENST00000523427 IFITM3Q01628 133 aa16.8■□□□□ 0.28
PVT1-219ENST00000523427 Q0VG73 95 aa16.79■□□□□ 0.28
PVT1-219ENST00000523427 C15orf54Q8N8G6 183 aa16.79■□□□□ 0.28
PVT1-219ENST00000523427 DAZAP1Q96EP5 407 aaKnown RBP16.79■□□□□ 0.28
PVT1-219ENST00000523427 M0R381 172 aa16.78■□□□□ 0.28
PVT1-219ENST00000523427 ATP6V0CP27449 155 aa16.78■□□□□ 0.28
PVT1-219ENST00000523427 ATRAIDQ6UW56 229 aa16.78■□□□□ 0.28
PVT1-219ENST00000523427 MARVELD1Q9BSK0 173 aa16.78■□□□□ 0.28
PVT1-219ENST00000523427 PHLDA3Q9Y5J5 127 aa16.78■□□□□ 0.28
PVT1-219ENST00000523427 TMSB15BA0A087X1C1 80 aa16.77■□□□□ 0.28
PVT1-219ENST00000523427 HLA-DQA1P01909 254 aa16.77■□□□□ 0.28
PVT1-219ENST00000523427 CRPP02741 224 aa16.77■□□□□ 0.28
PVT1-219ENST00000523427 UBE2G2P60604 165 aa16.77■□□□□ 0.28
PVT1-219ENST00000523427 RPL36AP83881 106 aaKnown RBP16.77■□□□□ 0.28
PVT1-219ENST00000523427 RPL36ALQ969Q0 106 aaKnown RBP16.77■□□□□ 0.28
PVT1-219ENST00000523427 CHCHD7Q9BUK0 85 aa16.77■□□□□ 0.28
PVT1-219ENST00000523427 ACTR3CQ9C0K3 210 aaPredicted RBP16.77■□□□□ 0.28
PVT1-219ENST00000523427 KRBOX1C9JBD0 128 aa16.76■□□□□ 0.27
PVT1-219ENST00000523427 CRIP1P50238 77 aa16.76■□□□□ 0.27
PVT1-219ENST00000523427 ENHOQ6UWT2 76 aa16.76■□□□□ 0.27
PVT1-219ENST00000523427 SFRP2Q96HF1 295 aa16.76■□□□□ 0.27
PVT1-219ENST00000523427 PKHD1L1Q86WI1 4243 aa16.75■□□□□ 0.27
PVT1-219ENST00000523427 USP17L23D6RBM5 183 aa16.75■□□□□ 0.27
PVT1-219ENST00000523427 ZC2HC1AQ96GY0 325 aa16.75■□□□□ 0.27
PVT1-219ENST00000523427 PSMG3Q9BT73 122 aaPredicted RBP16.75■□□□□ 0.27
PVT1-219ENST00000523427 SH2D1AO60880 128 aa16.74■□□□□ 0.27
PVT1-219ENST00000523427 MBP02144 154 aa16.74■□□□□ 0.27
PVT1-219ENST00000523427 TPT1P13693 172 aaKnown RBP16.74■□□□□ 0.27
PVT1-219ENST00000523427 UBE2D3P61077 147 aa16.74■□□□□ 0.27
PVT1-219ENST00000523427 UBE2D2P62837 147 aa16.74■□□□□ 0.27
PVT1-219ENST00000523427 Q86TA4 180 aa16.74■□□□□ 0.27
PVT1-219ENST00000523427 TRBV7-3A0A075B6L6 115 aa16.73■□□□□ 0.27
PVT1-219ENST00000523427 A0A1W2PRE2 83 aa16.73■□□□□ 0.27
PVT1-219ENST00000523427 PEX7O00628 323 aa16.73■□□□□ 0.27
PVT1-219ENST00000523427 ANGP03950 147 aaKnown RBP16.73■□□□□ 0.27
PVT1-219ENST00000523427 LINC00299Q6ZSB3 139 aa16.73■□□□□ 0.27
PVT1-219ENST00000523427 MPV17L2Q567V2 206 aa16.72■□□□□ 0.27
PVT1-219ENST00000523427 PRSS1P07477 247 aa16.71■□□□□ 0.27
PVT1-219ENST00000523427 SERF2P84101 59 aa16.71■□□□□ 0.27
PVT1-219ENST00000523427 TRBV6-8A0A0A6YYG3 113 aa16.7■□□□□ 0.26
PVT1-219ENST00000523427 TRBV10-1A0A0K0K1A3 114 aa16.7■□□□□ 0.26
PVT1-219ENST00000523427 DNLZQ5SXM8 178 aa16.7■□□□□ 0.26
PVT1-219ENST00000523427 CHCHD5Q9BSY4 110 aa16.7■□□□□ 0.26
PVT1-219ENST00000523427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.7■□□□□ 0.26
PVT1-219ENST00000523427 CLPSL2Q6UWE3 100 aa16.69■□□□□ 0.26
PVT1-219ENST00000523427 ZFP82Q8N141 532 aa16.69■□□□□ 0.26
PVT1-219ENST00000523427 TNFSF18Q9UNG2 199 aa16.69■□□□□ 0.26
PVT1-219ENST00000523427 FAM162BQ5T6X4 162 aa16.68■□□□□ 0.26
PVT1-219ENST00000523427 PANO1I0J062 215 aa16.67■□□□□ 0.26
PVT1-219ENST00000523427 PTTG1O95997 202 aa16.67■□□□□ 0.26
PVT1-219ENST00000523427 ZNF56Q15929 161 aa16.66■□□□□ 0.26
PVT1-219ENST00000523427 ZNF726P1Q15940 193 aa16.66■□□□□ 0.26
PVT1-219ENST00000523427 MT1HL1P0DM35 61 aa16.65■□□□□ 0.26
PVT1-219ENST00000523427 C9orf163Q8N9P6 203 aa16.65■□□□□ 0.26
PVT1-219ENST00000523427 NEXN-AS1Q8NBZ9 246 aa16.65■□□□□ 0.26
PVT1-219ENST00000523427 HIST1H2BAQ96A08 127 aa16.65■□□□□ 0.26
PVT1-219ENST00000523427 ZFP30Q9Y2G7 519 aa16.65■□□□□ 0.26
PVT1-219ENST00000523427 FAM74A7A6NL05 159 aa16.64■□□□□ 0.25
PVT1-219ENST00000523427 DEFA1P59665 94 aa16.64■□□□□ 0.25
PVT1-219ENST00000523427 DEFA3P59666 94 aa16.64■□□□□ 0.25
PVT1-219ENST00000523427 UBE2G1P62253 170 aa16.64■□□□□ 0.25
PVT1-219ENST00000523427 DGAT2L7PQ6IED9 249 aa16.64■□□□□ 0.25
PVT1-219ENST00000523427 AQP10Q96PS8 301 aa16.64■□□□□ 0.25
PVT1-219ENST00000523427 MIAQ16674 131 aa16.63■□□□□ 0.25
PVT1-219ENST00000523427 OR10G8Q8NGN5 311 aa16.63■□□□□ 0.25
PVT1-219ENST00000523427 CTXND1A0A1B0GTU2 59 aa16.62■□□□□ 0.25
PVT1-219ENST00000523427 LINC01559Q495D7 138 aa16.62■□□□□ 0.25
PVT1-219ENST00000523427 DPH3Q96FX2 82 aa16.62■□□□□ 0.25
PVT1-219ENST00000523427 RAB4BP61018 213 aa16.61■□□□□ 0.25
PVT1-219ENST00000523427 SSTP61278 116 aa16.61■□□□□ 0.25
PVT1-219ENST00000523427 GAGE6Q13070 117 aa16.61■□□□□ 0.25
PVT1-219ENST00000523427 ZNF674Q2M3X9 581 aa16.61■□□□□ 0.25
PVT1-219ENST00000523427 RPL7L1Q6DKI1 246 aaKnown RBP16.61■□□□□ 0.25
PVT1-219ENST00000523427 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.61■□□□□ 0.25
PVT1-219ENST00000523427 ALG5Q9Y673 324 aa16.61■□□□□ 0.25
PVT1-219ENST00000523427 MUC21A0A0G2JKD1 596 aa16.6■□□□□ 0.25
PVT1-219ENST00000523427 MUC21A0A140T8X8 626 aa16.6■□□□□ 0.25
PVT1-219ENST00000523427 SDIM1Q6ZPB5 146 aa16.6■□□□□ 0.25
PVT1-219ENST00000523427 LINC00269Q8N2A0 174 aa16.6■□□□□ 0.25
PVT1-219ENST00000523427 FMC1Q96HJ9 113 aa16.6■□□□□ 0.25
PVT1-219ENST00000523427 A0A0D9SG52 128 aa16.59■□□□□ 0.25
PVT1-219ENST00000523427 F5H697 171 aa16.59■□□□□ 0.25
PVT1-219ENST00000523427 COX8CQ7Z4L0 72 aa16.59■□□□□ 0.25
PVT1-219ENST00000523427 OR10AG1Q8NH19 301 aa16.59■□□□□ 0.25
PVT1-219ENST00000523427 NKX6-2Q9C056 277 aaPredicted RBP16.59■□□□□ 0.25
PVT1-219ENST00000523427 RBX1P62877 108 aa16.58■□□□□ 0.24
PVT1-219ENST00000523427 RPL19P84098 196 aaKnown RBP16.58■□□□□ 0.24
PVT1-219ENST00000523427 Q5BKY6 102 aa16.58■□□□□ 0.24
PVT1-219ENST00000523427 IGLV10-54A0A075B6I4 117 aa16.57■□□□□ 0.24
PVT1-219ENST00000523427 A6NHS1 94 aa16.57■□□□□ 0.24
PVT1-219ENST00000523427 PKIAP61925 76 aa16.57■□□□□ 0.24
PVT1-219ENST00000523427 Q6ZRU5 148 aa16.57■□□□□ 0.24
PVT1-219ENST00000523427 NTM-AS1Q6ZSK4 140 aa16.57■□□□□ 0.24
PVT1-219ENST00000523427 BORCS7-ASMTA0A0B4J1R7 106 aa16.56■□□□□ 0.24
PVT1-219ENST00000523427 CST9LP1Q5W188 147 aa16.56■□□□□ 0.24
PVT1-219ENST00000523427 PRR27Q6MZM9 219 aa16.56■□□□□ 0.24
PVT1-219ENST00000523427 AKR1C8PQ5T2L2 129 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms