RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GNG5P63218 68 aa8.41□□□□□ -1.06
NKX3-1-202ENST00000523261 HBG1P69891 147 aa8.41□□□□□ -1.06
NKX3-1-202ENST00000523261 HBG2P69892 147 aa8.41□□□□□ -1.06
NKX3-1-202ENST00000523261 REG3AQ06141 175 aa8.41□□□□□ -1.06
NKX3-1-202ENST00000523261 ATP6V1FQ16864 119 aa8.41□□□□□ -1.06
NKX3-1-202ENST00000523261 C15orf56Q8N910 161 aa8.41□□□□□ -1.06
NKX3-1-202ENST00000523261 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 P01737 135 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 GAGE6Q13070 117 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 FAM74A1Q5RGS3 127 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 NTM-AS1Q6ZSK4 140 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 TMEM252Q8N6L7 170 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 THAP6Q8TBB0 222 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 IL36BQ9NZH7 164 aa8.4□□□□□ -1.06
NKX3-1-202ENST00000523261 GZMBP10144 247 aa8.39□□□□□ -1.07
NKX3-1-202ENST00000523261 STX12Q86Y82 276 aa8.39□□□□□ -1.07
NKX3-1-202ENST00000523261 SFRP2Q96HF1 295 aa8.39□□□□□ -1.07
NKX3-1-202ENST00000523261 LINC00474Q9P2X8 69 aa8.39□□□□□ -1.07
NKX3-1-202ENST00000523261 MBD2Q9UBB5 411 aa8.39□□□□□ -1.07
NKX3-1-202ENST00000523261 FLVCR2Q9UPI3 526 aa8.39□□□□□ -1.07
NKX3-1-202ENST00000523261 H3BVH4 76 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 RAB5CP51148 216 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 SPCS2Q15005 226 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 SMUG1Q53HV7 270 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 KHDC3LQ587J8 217 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 INO80EQ8NBZ0 244 aaPredicted RBP8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 DEDD2Q8WXF8 326 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
NKX3-1-202ENST00000523261 OR11H4Q8NGC9 324 aa8.37□□□□□ -1.07
NKX3-1-202ENST00000523261 MITD1Q8WV92 249 aa8.37□□□□□ -1.07
NKX3-1-202ENST00000523261 EIF3GO75821 320 aaKnown RBP eCLIP8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 NDUFB6O95139 128 aa8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 ATP6V1G2O95670 118 aa8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 PVALBP20472 110 aaPredicted RBP8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 ZFP69Q49AA0 526 aa8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 HIGD2BQ4VC39 106 aa8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 C20orf203Q8NBC4 194 aa8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 KCNIP2Q9NS61 270 aa8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 PSG8Q9UQ74 426 aa8.36□□□□□ -1.07
NKX3-1-202ENST00000523261 MUC17Q685J3 4493 aa8.35□□□□□ -1.07
NKX3-1-202ENST00000523261 IGLV1-50A0A075B6I6 118 aa8.35□□□□□ -1.07
NKX3-1-202ENST00000523261 ARMS2P0C7Q2 107 aa8.35□□□□□ -1.07
NKX3-1-202ENST00000523261 SERTM2A0A1B0GWG4 89 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 TAS2R45P59539 299 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 PYDC2Q56P42 97 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 TMEM97Q5BJF2 176 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 DNLZQ5SXM8 178 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 PRR27Q6MZM9 219 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 FER1L6-AS1Q8NA97 138 aa8.34□□□□□ -1.07
NKX3-1-202ENST00000523261 TCRAP04437 139 aa8.33□□□□□ -1.08
NKX3-1-202ENST00000523261 FLI1Q01543 452 aaPredicted RBP8.33□□□□□ -1.08
NKX3-1-202ENST00000523261 NHLH2Q02577 135 aa8.33□□□□□ -1.08
NKX3-1-202ENST00000523261 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.33□□□□□ -1.08
NKX3-1-202ENST00000523261 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
NKX3-1-202ENST00000523261 MRPS26Q9BYN8 205 aaKnown RBP8.33□□□□□ -1.08
NKX3-1-202ENST00000523261 WDR61Q9GZS3 305 aaKnown RBP8.33□□□□□ -1.08
NKX3-1-202ENST00000523261 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 FAM25EA8MYX2 175 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 M0R381 172 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 MT-ND6P03923 174 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 RAB4BP61018 213 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 IQCJQ1A5X6 159 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 OR5C1Q8NGR4 320 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 SUN5Q8TC36 379 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 DERL1Q9BUN8 251 aa8.32□□□□□ -1.08
NKX3-1-202ENST00000523261 IGLV4-60A0A075B6I1 120 aa8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 GVQW2A0A096LPI5 108 aaPredicted RBP8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 B4DEV8 164 aa8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 RAB2AP61019 212 aa8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 PHLDA3Q9Y5J5 127 aa8.31□□□□□ -1.08
NKX3-1-202ENST00000523261 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 FABP5P3A8MUU1 101 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 KRBOX1C9JBD0 128 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 IL15RAQ13261 267 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 RAB32Q13637 225 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 SAPCD1Q5SSQ6 148 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 C5orf17Q8NAS9 161 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 PKIGQ9Y2B9 76 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 V9GYH0 126 aa8.3□□□□□ -1.08
NKX3-1-202ENST00000523261 A0A1B0GUV1 79 aa8.29□□□□□ -1.08
NKX3-1-202ENST00000523261 GRIFINA4D1Z8 144 aa8.29□□□□□ -1.08
NKX3-1-202ENST00000523261 H0Y9J4 135 aa8.29□□□□□ -1.08
NKX3-1-202ENST00000523261 K7EQM0 130 aa8.29□□□□□ -1.08
NKX3-1-202ENST00000523261 TPT1P13693 172 aaKnown RBP8.29□□□□□ -1.08
NKX3-1-202ENST00000523261 ZNF56Q15929 161 aa8.29□□□□□ -1.08
NKX3-1-202ENST00000523261 PQLC2Q6ZP29 291 aa8.29□□□□□ -1.08
NKX3-1-202ENST00000523261 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
NKX3-1-202ENST00000523261 IGHV1-24A0A0C4DH33 117 aa8.28□□□□□ -1.08
NKX3-1-202ENST00000523261 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
NKX3-1-202ENST00000523261 ZFP82Q8N141 532 aa8.28□□□□□ -1.08
NKX3-1-202ENST00000523261 A0A1W2PNN7 141 aa8.27□□□□□ -1.09
NKX3-1-202ENST00000523261 M0R036 132 aa8.27□□□□□ -1.09
NKX3-1-202ENST00000523261 AQP10Q96PS8 301 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms