RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 BEAN1Q3B7T3 259 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 PET117Q6UWS5 81 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 LINC00482Q8N8I6 264 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 SYT8Q8NBV8 401 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 C20orf144Q9BQM9 153 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 FLNBO75369 2602 aaKnown RBP12.32□□□□□ -0.44
SREK1-212ENST00000522912 PF4P02776 101 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 FCER1GP30273 86 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 DEFA6Q01524 100 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 MAJINQ3KP22 176 aa12.32□□□□□ -0.44
SREK1-212ENST00000522912 H0Y8G0 127 aa12.31□□□□□ -0.44
SREK1-212ENST00000522912 INSP01308 110 aa12.31□□□□□ -0.44
SREK1-212ENST00000522912 SMIM2Q9BVW6 85 aa12.31□□□□□ -0.44
SREK1-212ENST00000522912 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
SREK1-212ENST00000522912 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
SREK1-212ENST00000522912 SUMO2P61956 95 aaKnown RBP12.3□□□□□ -0.44
SREK1-212ENST00000522912 ZNF876PQ49A33 203 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.3□□□□□ -0.44
SREK1-212ENST00000522912 LINC01587Q99440 93 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 TCAPO15273 167 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 CRYGDP07320 174 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
SREK1-212ENST00000522912 TMEM158Q8WZ71 300 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 C14orf144Q96I85 54 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 WFDC10AQ9H1F0 79 aa12.3□□□□□ -0.44
SREK1-212ENST00000522912 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
SREK1-212ENST00000522912 LINC01545Q5VT33 79 aa12.29□□□□□ -0.44
SREK1-212ENST00000522912 F8P00451 2351 aa12.29□□□□□ -0.44
SREK1-212ENST00000522912 JMJD1CQ15652 2540 aa12.29□□□□□ -0.44
SREK1-212ENST00000522912 C20orf202A1L168 122 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 LAGE3Q14657 143 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 TRAV9-2A0A087WT02 112 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 F5H697 171 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 FAM110AQ9BQ89 295 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 PMCHL2Q9BQD1 86 aa12.28□□□□□ -0.44
SREK1-212ENST00000522912 ZNF705AQ6ZN79 300 aaPredicted RBP12.27□□□□□ -0.44
SREK1-212ENST00000522912 SPATA3Q8NHX4 192 aa12.27□□□□□ -0.44
SREK1-212ENST00000522912 TENM1Q9UKZ4 2725 aa12.27□□□□□ -0.45
SREK1-212ENST00000522912 PPP1R17O96001 155 aa12.27□□□□□ -0.45
SREK1-212ENST00000522912 ZNF415Q09FC8 603 aa12.27□□□□□ -0.45
SREK1-212ENST00000522912 C11orf72Q8NBR9 251 aa12.27□□□□□ -0.45
SREK1-212ENST00000522912 C18orf15Q96N68 181 aa12.27□□□□□ -0.45
SREK1-212ENST00000522912 NDUFAF3Q9BU61 184 aa12.27□□□□□ -0.45
SREK1-212ENST00000522912 GIG44P09565 113 aaPredicted RBP12.25□□□□□ -0.45
SREK1-212ENST00000522912 IGLL1P15814 213 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 MIEN1Q9BRT3 115 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 CSTL1Q9H114 145 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 NACAE9PAV3 2078 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 M0R2P5 195 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 AZU1P20160 251 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 NUTF2P61970 127 aaKnown RBP12.25□□□□□ -0.45
SREK1-212ENST00000522912 ZNF56Q15929 161 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
SREK1-212ENST00000522912 MORN3Q6PF18 240 aaPredicted RBP12.24□□□□□ -0.45
SREK1-212ENST00000522912 NEGR1Q7Z3B1 354 aa12.24□□□□□ -0.45
SREK1-212ENST00000522912 CITED1Q99966 193 aa12.24□□□□□ -0.45
SREK1-212ENST00000522912 TMEM208Q9BTX3 173 aa12.24□□□□□ -0.45
SREK1-212ENST00000522912 VWFP04275 2813 aa12.24□□□□□ -0.45
SREK1-212ENST00000522912 IGHV3OR16-12A0A075B7B8 117 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 hDV102S1A0JD36 115 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 M0QY20 66 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 IGLC3P0DOY3 106 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 POLR2KP53803 58 aaKnown RBP12.23□□□□□ -0.45
SREK1-212ENST00000522912 NUDT3O95989 172 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 RPL35AP18077 110 aaKnown RBP12.23□□□□□ -0.45
SREK1-212ENST00000522912 RPL32P62910 135 aaKnown RBP12.23□□□□□ -0.45
SREK1-212ENST00000522912 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 PTH2Q96A98 100 aa12.23□□□□□ -0.45
SREK1-212ENST00000522912 ORMDL2Q53FV1 153 aa12.22□□□□□ -0.45
SREK1-212ENST00000522912 TRBV6-5A0A0K0K1A5 114 aa12.21□□□□□ -0.45
SREK1-212ENST00000522912 PIK3CD-AS1Q5SR53 167 aa12.21□□□□□ -0.45
SREK1-212ENST00000522912 SPXQ9BT56 116 aa12.21□□□□□ -0.45
SREK1-212ENST00000522912 K7EMI3 77 aa12.21□□□□□ -0.46
SREK1-212ENST00000522912 UFSP1Q6NVU6 142 aa12.21□□□□□ -0.46
SREK1-212ENST00000522912 TEP1Q99973 2627 aaKnown RBP12.21□□□□□ -0.46
SREK1-212ENST00000522912 IGHV3-73A0A0B4J1V6 119 aa12.2□□□□□ -0.46
SREK1-212ENST00000522912 MRPL16Q9NX20 251 aaKnown RBP12.2□□□□□ -0.46
SREK1-212ENST00000522912 GOLT1BQ9Y3E0 138 aa12.2□□□□□ -0.46
SREK1-212ENST00000522912 ATRQ13535 2644 aa12.2□□□□□ -0.46
SREK1-212ENST00000522912 SDHAF1A6NFY7 115 aa12.2□□□□□ -0.46
SREK1-212ENST00000522912 A8MWV9 139 aa12.2□□□□□ -0.46
SREK1-212ENST00000522912 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
SREK1-212ENST00000522912 ATP5LO75964 103 aa12.19□□□□□ -0.46
SREK1-212ENST00000522912 CFAP126Q5VTH2 177 aa12.19□□□□□ -0.46
SREK1-212ENST00000522912 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
SREK1-212ENST00000522912 TOMM6Q96B49 74 aa12.19□□□□□ -0.46
SREK1-212ENST00000522912 DKK2Q9UBU2 259 aa12.19□□□□□ -0.46
SREK1-212ENST00000522912 UQCR10Q9UDW1 63 aa12.19□□□□□ -0.46
SREK1-212ENST00000522912 VCYO14598 125 aa12.18□□□□□ -0.46
SREK1-212ENST00000522912 PRSS1P07477 247 aa12.18□□□□□ -0.46
SREK1-212ENST00000522912 C9orf66Q5T8R8 295 aa12.18□□□□□ -0.46
SREK1-212ENST00000522912 RNASE8Q8TDE3 154 aaKnown RBP12.18□□□□□ -0.46
SREK1-212ENST00000522912 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms