RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PHLDA3Q9Y5J5 127 aa11.22□□□□□ -0.61
PABPC1-221ENST00000522720 LY96Q9Y6Y9 160 aa11.22□□□□□ -0.61
PABPC1-221ENST00000522720 F8W036 122 aa11.21□□□□□ -0.61
PABPC1-221ENST00000522720 CXCL1P09341 107 aa11.21□□□□□ -0.61
PABPC1-221ENST00000522720 JPT2Q9H910 190 aa11.21□□□□□ -0.61
PABPC1-221ENST00000522720 PKD1P98161 4303 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 BTF3P20290 206 aaKnown RBP11.2□□□□□ -0.62
PABPC1-221ENST00000522720 TIRAPP58753 221 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 RPL19P84098 196 aaKnown RBP11.2□□□□□ -0.62
PABPC1-221ENST00000522720 CENPWQ5EE01 88 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 PRR27Q6MZM9 219 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 UFSP1Q6NVU6 142 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 Q6ZSN1 163 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 NAT8Q9UHE5 227 aa11.2□□□□□ -0.62
PABPC1-221ENST00000522720 M0R381 172 aa11.19□□□□□ -0.62
PABPC1-221ENST00000522720 IGLV2-8P01709 118 aa11.19□□□□□ -0.62
PABPC1-221ENST00000522720 ZFP82Q8N141 532 aa11.19□□□□□ -0.62
PABPC1-221ENST00000522720 SFRP2Q96HF1 295 aa11.19□□□□□ -0.62
PABPC1-221ENST00000522720 RHODO00212 210 aa11.18□□□□□ -0.62
PABPC1-221ENST00000522720 PNRC1Q12796 327 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-221ENST00000522720 CRYGDP07320 174 aa11.17□□□□□ -0.62
PABPC1-221ENST00000522720 TNP2Q05952 138 aa11.17□□□□□ -0.62
PABPC1-221ENST00000522720 C10orf91Q5T1B1 145 aa11.17□□□□□ -0.62
PABPC1-221ENST00000522720 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-221ENST00000522720 TRBV20OR9-2A0A075B6H5 130 aa11.16□□□□□ -0.62
PABPC1-221ENST00000522720 SNAI2O43623 268 aa11.16□□□□□ -0.62
PABPC1-221ENST00000522720 S100A1P23297 94 aa11.16□□□□□ -0.62
PABPC1-221ENST00000522720 WFDC10BQ8IUB3 73 aa11.16□□□□□ -0.62
PABPC1-221ENST00000522720 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 TRAV9-2A0A087WT02 112 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 A0A087WWL8 130 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 K7EP13 123 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 OR5AL1P0C617 328 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 DNAH10OSP0CZ25 163 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 FAM74A4Q5TZK3 123 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 C14orf178Q8N769 122 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-221ENST00000522720 OR10AG1Q8NH19 301 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 ATP6V0E2Q8NHE4 81 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 DAZAP1Q96EP5 407 aaKnown RBP11.15□□□□□ -0.62
PABPC1-221ENST00000522720 Q9UF83 564 aa11.15□□□□□ -0.62
PABPC1-221ENST00000522720 CARHSP1Q9Y2V2 147 aaKnown RBP11.15□□□□□ -0.62
PABPC1-221ENST00000522720 EVI2AP22794 236 aa11.14□□□□□ -0.63
PABPC1-221ENST00000522720 LINC00315P59091 139 aa11.14□□□□□ -0.63
PABPC1-221ENST00000522720 SVBPQ8N300 66 aa11.14□□□□□ -0.63
PABPC1-221ENST00000522720 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
PABPC1-221ENST00000522720 GAGE12JA6NER3 117 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 LINC00694P0DN24 101 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
PABPC1-221ENST00000522720 GAGE1Q13065 139 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 GAGE4Q13068 117 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 GAGE5Q13069 117 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 LINC01551Q86U37 167 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 OR2D3Q8NGH3 330 aa11.13□□□□□ -0.63
PABPC1-221ENST00000522720 DNAH11Q96DT5 4516 aa11.12□□□□□ -0.63
PABPC1-221ENST00000522720 TRAV8-6A0A0B4J262 113 aa11.12□□□□□ -0.63
PABPC1-221ENST00000522720 IGHV3-38A0A0C4DH36 116 aa11.12□□□□□ -0.63
PABPC1-221ENST00000522720 SNAPINO95295 136 aa11.12□□□□□ -0.63
PABPC1-221ENST00000522720 APOC3P02656 99 aa11.12□□□□□ -0.63
PABPC1-221ENST00000522720 RPL23P62829 140 aaKnown RBP11.12□□□□□ -0.63
PABPC1-221ENST00000522720 LELP1Q5T871 98 aa11.12□□□□□ -0.63
PABPC1-221ENST00000522720 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
PABPC1-221ENST00000522720 MUC21A0A0G2JKD1 596 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 MUC21A0A140T8X8 626 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 P01737 135 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 IGLC6P0CF74 106 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 GZMBP10144 247 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 ADIRFQ15847 76 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 OR10J3Q5JRS4 329 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-221ENST00000522720 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
PABPC1-221ENST00000522720 TRBV10-1A0A0K0K1A3 114 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 XKRY2A2RUG3 117 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 ERVFC1-1P60608 527 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 RAB4BP61018 213 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 LINC01556Q5JQF7 62 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 FAM231DQ6ZW35 169 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 TNFRSF18Q9Y5U5 241 aa11.1□□□□□ -0.63
PABPC1-221ENST00000522720 DYNC1H1Q14204 4646 aaKnown RBP11.1□□□□□ -0.63
PABPC1-221ENST00000522720 ADCYAP1P18509 176 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 SSTP61278 116 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 C10orf126Q8N4M7 172 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 FER1L6-AS1Q8NA97 138 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 NUDT10Q8NFP7 164 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 ANAPC16Q96DE5 110 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 NUDT11Q96G61 164 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 OSTCQ9NRP0 149 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 MSRB1Q9NZV6 116 aa11.09□□□□□ -0.63
PABPC1-221ENST00000522720 F2Z2F3 143 aa11.08□□□□□ -0.64
PABPC1-221ENST00000522720 K7EN84 100 aa11.08□□□□□ -0.64
PABPC1-221ENST00000522720 RHEBQ15382 184 aa11.08□□□□□ -0.64
PABPC1-221ENST00000522720 CLRN3Q8NCR9 226 aa11.08□□□□□ -0.64
PABPC1-221ENST00000522720 ISOC2Q96AB3 205 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms