RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 A0A0D9SG52 128 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 TMEM262E9PQX1 116 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 RHODO00212 210 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 LYRM1O43325 122 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 ASIPP42127 132 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 PKIAP61925 76 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 SMUG1Q53HV7 270 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 PQLC2Q6ZP29 291 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 OR2G3Q8NGZ4 309 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 DPH3Q96FX2 82 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 CHCHD7Q9BUK0 85 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 WDR61Q9GZS3 305 aaKnown RBP4.08□□□□□ -1.76
PABPC1-220ENST00000522658 OR5AC2Q9NZP5 309 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 MBD2Q9UBB5 411 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 KLK12Q9UKR0 248 aa4.08□□□□□ -1.76
PABPC1-220ENST00000522658 TMA7Q9Y2S6 64 aaKnown RBP4.08□□□□□ -1.76
PABPC1-220ENST00000522658 FAM240BA0A1B0GVZ2 78 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 GCGP01275 180 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 TCRBP04435 133 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 IL7P13232 177 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 BTCP35070 178 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 GNG5P63218 68 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 RPL36AP83881 106 aaKnown RBP4.07□□□□□ -1.76
PABPC1-220ENST00000522658 MZT2BQ6NZ67 158 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 ZFP2Q6ZN57 461 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 OR2T35Q8NGX2 323 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 PARLQ9H300 379 aa4.07□□□□□ -1.76
PABPC1-220ENST00000522658 ANGP03950 147 aaKnown RBP4.06□□□□□ -1.76
PABPC1-220ENST00000522658 CYCSP99999 105 aaKnown RBP4.06□□□□□ -1.76
PABPC1-220ENST00000522658 PRNTQ86SH4 94 aa4.06□□□□□ -1.76
PABPC1-220ENST00000522658 NIT1Q86X76 327 aa4.06□□□□□ -1.76
PABPC1-220ENST00000522658 ARL6IP6Q8N6S5 226 aa4.06□□□□□ -1.76
PABPC1-220ENST00000522658 C5orf17Q8NAS9 161 aa4.06□□□□□ -1.76
PABPC1-220ENST00000522658 OR11H4Q8NGC9 324 aa4.06□□□□□ -1.76
PABPC1-220ENST00000522658 ENKURQ8TC29 256 aa4.06□□□□□ -1.76
PABPC1-220ENST00000522658 C9orf85Q96MD7 179 aa4.06□□□□□ -1.76
PABPC1-220ENST00000522658 RNF222A6NCQ9 220 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 PGPEP1LA6NFU8 196 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 H3BVH4 76 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 CDC34P49427 236 aaPredicted RBP4.05□□□□□ -1.76
PABPC1-220ENST00000522658 FLI1Q01543 452 aaPredicted RBP4.05□□□□□ -1.76
PABPC1-220ENST00000522658 SAPCD1Q5SSQ6 148 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 DPPA3Q6W0C5 159 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 Q6ZRU5 148 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 C15orf54Q8N8G6 183 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 TMEM75Q8N9X5 138 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 SGK494Q96LW2 274 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 SMIM3Q9BZL3 60 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 C11orf1Q9H5F2 150 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 PSG8Q9UQ74 426 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 PHLDA3Q9Y5J5 127 aa4.05□□□□□ -1.76
PABPC1-220ENST00000522658 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.04□□□□□ -1.76
PABPC1-220ENST00000522658 B4DEV8 164 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 USP17L23D6RBM5 183 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 IFNA7P01567 189 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 TCRAP04437 139 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 ARL14EPLP0DKL9 152 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 TPT1P13693 172 aaKnown RBP4.04□□□□□ -1.76
PABPC1-220ENST00000522658 RPL19P84098 196 aaKnown RBP4.04□□□□□ -1.76
PABPC1-220ENST00000522658 PIK3CD-AS1Q5SR53 167 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 OR10G7Q8NGN6 311 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 PTH2Q96A98 100 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 CHCHD5Q9BSY4 110 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 HSPB11Q9Y547 144 aa4.04□□□□□ -1.76
PABPC1-220ENST00000522658 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 M0R381 172 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 HMGB3O15347 200 aaKnown RBP4.03□□□□□ -1.76
PABPC1-220ENST00000522658 EIF3GO75821 320 aaKnown RBP eCLIP4.03□□□□□ -1.76
PABPC1-220ENST00000522658 RNASE3P12724 160 aaKnown RBP4.03□□□□□ -1.76
PABPC1-220ENST00000522658 ZNF56Q15929 161 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 MIAQ16674 131 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 TMEM97Q5BJF2 176 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 DGAT2L7PQ6IED9 249 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 ZFP82Q8N141 532 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 C14orf178Q8N769 122 aaPredicted RBP4.03□□□□□ -1.76
PABPC1-220ENST00000522658 CCDC32Q9BV29 185 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 SAMD10Q9BYL1 202 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 TMEM167BQ9NRX6 74 aa4.03□□□□□ -1.76
PABPC1-220ENST00000522658 TRBV7-3A0A075B6L6 115 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 A0A087WWL8 130 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 FABP5P3A8MUU1 101 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 M0R036 132 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 SSNA1O43805 119 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 SIX6O95475 246 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 CXorf1O96002 111 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 MBP02144 154 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 SMIM17P0DL12 118 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 LINC00694P0DN24 101 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 RPL12P30050 165 aaKnown RBP4.02□□□□□ -1.77
PABPC1-220ENST00000522658 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
PABPC1-220ENST00000522658 RAB2AP61019 212 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 UBE2G1P62253 170 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 WDR73Q6P4I2 378 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 CLPSL2Q6UWE3 100 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 PPP1R1CQ8WVI7 109 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 TVP23CQ96ET8 276 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 LINC00479Q96M42 142 aa4.02□□□□□ -1.77
PABPC1-220ENST00000522658 IL36BQ9NZH7 164 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms