RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 A0A1B0GW15 77 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 RS1O15537 224 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 TRGC1P0CF51 173 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
CLK4-210ENST00000522136 PIK3CD-AS1Q5SR53 167 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 ZNF479Q96JC4 524 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 KIF25-AS1Q9Y6Z4 181 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 PRKDCP78527 4128 aaKnown RBP9.5□□□□□ -0.89
CLK4-210ENST00000522136 HUWE1Q7Z6Z7 4374 aaKnown RBP9.5□□□□□ -0.89
CLK4-210ENST00000522136 LINC00315P59091 139 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 DAD1P61803 113 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 TMEM191AQ9H0A3 160 aa9.5□□□□□ -0.89
CLK4-210ENST00000522136 DNAH9Q9NYC9 4486 aa9.49□□□□□ -0.89
CLK4-210ENST00000522136 A8MWV9 139 aa9.49□□□□□ -0.89
CLK4-210ENST00000522136 MGPP08493 103 aa9.49□□□□□ -0.89
CLK4-210ENST00000522136 C12orf74Q32Q52 190 aa9.49□□□□□ -0.89
CLK4-210ENST00000522136 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
CLK4-210ENST00000522136 S100A8P05109 93 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 SMIM17P0DL12 118 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 RAB5AP20339 215 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 TRAV4A0A0B4J268 109 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 RPS10P46783 165 aaKnown RBP9.48□□□□□ -0.89
CLK4-210ENST00000522136 SLAQ13239 276 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 FAM104BQ5XKR9 115 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 Q6ZSN1 163 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 NDUFAF3Q9BU61 184 aa9.48□□□□□ -0.89
CLK4-210ENST00000522136 RAB4AP20338 218 aa9.47□□□□□ -0.89
CLK4-210ENST00000522136 NANOS2P60321 138 aaKnown RBP9.47□□□□□ -0.89
CLK4-210ENST00000522136 KIAA1644Q3SXP7 199 aa9.47□□□□□ -0.89
CLK4-210ENST00000522136 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
CLK4-210ENST00000522136 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
CLK4-210ENST00000522136 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.89
CLK4-210ENST00000522136 F5H697 171 aa9.46□□□□□ -0.89
CLK4-210ENST00000522136 GAS8-AS1O95177 125 aa9.46□□□□□ -0.89
CLK4-210ENST00000522136 ZNF56Q15929 161 aa9.46□□□□□ -0.89
CLK4-210ENST00000522136 FRZBQ92765 325 aa9.46□□□□□ -0.89
CLK4-210ENST00000522136 MRPL18Q9H0U6 180 aaKnown RBP9.46□□□□□ -0.89
CLK4-210ENST00000522136 FBN3Q75N90 2809 aa9.46□□□□□ -0.89
CLK4-210ENST00000522136 TEX48A0A1B0GUV7 120 aa9.46□□□□□ -0.9
CLK4-210ENST00000522136 SMKR1H3BMG3 65 aa9.46□□□□□ -0.9
CLK4-210ENST00000522136 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
CLK4-210ENST00000522136 FABP9Q0Z7S8 132 aa9.46□□□□□ -0.9
CLK4-210ENST00000522136 MRPL51Q4U2R6 128 aaKnown RBP9.46□□□□□ -0.9
CLK4-210ENST00000522136 C18orf15Q96N68 181 aa9.46□□□□□ -0.9
CLK4-210ENST00000522136 U3KQK5 164 aa9.46□□□□□ -0.9
CLK4-210ENST00000522136 APCSP02743 223 aa9.45□□□□□ -0.9
CLK4-210ENST00000522136 HTN3P15516 51 aa9.45□□□□□ -0.9
CLK4-210ENST00000522136 HOXA5P20719 270 aa9.45□□□□□ -0.9
CLK4-210ENST00000522136 FHL2Q14192 279 aa9.45□□□□□ -0.9
CLK4-210ENST00000522136 COX19Q49B96 90 aa9.45□□□□□ -0.9
CLK4-210ENST00000522136 Q6ZTC4 211 aa9.45□□□□□ -0.9
CLK4-210ENST00000522136 NCR2O95944 276 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 TRGC2P03986 189 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 GATA1P15976 413 aaPredicted RBP9.44□□□□□ -0.9
CLK4-210ENST00000522136 SUMO4Q6EEV6 95 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 ZFP2Q6ZN57 461 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 Q9UF83 564 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 RHODO00212 210 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 MT-ND6P03923 174 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 ATP5G1P05496 136 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 P0DMU3 169 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 STAB2Q8WWQ8 2551 aa9.44□□□□□ -0.9
CLK4-210ENST00000522136 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
CLK4-210ENST00000522136 D6R8Y8 96 aa9.43□□□□□ -0.9
CLK4-210ENST00000522136 F5H768 121 aa9.43□□□□□ -0.9
CLK4-210ENST00000522136 CKS2P33552 79 aa9.42□□□□□ -0.9
CLK4-210ENST00000522136 M0QY20 66 aa9.41□□□□□ -0.9
CLK4-210ENST00000522136 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
CLK4-210ENST00000522136 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
CLK4-210ENST00000522136 PHOX2AO14813 284 aa9.41□□□□□ -0.9
CLK4-210ENST00000522136 CIDEAO60543 219 aa9.41□□□□□ -0.9
CLK4-210ENST00000522136 MRAP2Q96G30 205 aa9.41□□□□□ -0.9
CLK4-210ENST00000522136 HHLA3Q9XRX5 114 aa9.41□□□□□ -0.9
CLK4-210ENST00000522136 A0A0J9YY99 117 aa9.4□□□□□ -0.9
CLK4-210ENST00000522136 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.9
CLK4-210ENST00000522136 CRYBA4P53673 196 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 ORMDL3Q8N138 153 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 NRACQ8N912 160 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 PRELID3AQ96N28 172 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 ALKBH7Q9BT30 221 aaPredicted RBP9.39□□□□□ -0.91
CLK4-210ENST00000522136 DEFB131BA0A096LNP1 70 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 K7EQD1 137 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 NPYP01303 97 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 SRIP30626 198 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 PRO0255Q9UI72 69 aa9.39□□□□□ -0.91
CLK4-210ENST00000522136 TRAV26-1A0A087WT03 109 aa9.38□□□□□ -0.91
CLK4-210ENST00000522136 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
CLK4-210ENST00000522136 VSIG2Q96IQ7 327 aa9.38□□□□□ -0.91
CLK4-210ENST00000522136 PAX4O43316 350 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms