RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 FANCD2OSQ96PS1 177 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 TTTY13Q9BZ97 58 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 SUMO4Q6EEV6 95 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 MYO18BQ8IUG5 2567 aa10.66□□□□□ -0.7
SYNPO-205ENST00000522122 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.7
SYNPO-205ENST00000522122 ZFP2Q6ZN57 461 aa10.65□□□□□ -0.7
SYNPO-205ENST00000522122 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
SYNPO-205ENST00000522122 DAD1P61803 113 aa10.65□□□□□ -0.7
SYNPO-205ENST00000522122 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
SYNPO-205ENST00000522122 F5H768 121 aa10.65□□□□□ -0.7
SYNPO-205ENST00000522122 FXYD2P54710 66 aa10.65□□□□□ -0.7
SYNPO-205ENST00000522122 U3KQE9 123 aa10.65□□□□□ -0.7
SYNPO-205ENST00000522122 NXPH4O95158 308 aa10.64□□□□□ -0.71
SYNPO-205ENST00000522122 CRYGBP07316 175 aa10.64□□□□□ -0.71
SYNPO-205ENST00000522122 TRAV13-2A0A0B4J235 113 aa10.64□□□□□ -0.71
SYNPO-205ENST00000522122 ADORA2A-AS1P86434 159 aa10.63□□□□□ -0.71
SYNPO-205ENST00000522122 SH2D6Q7Z4S9 175 aa10.63□□□□□ -0.71
SYNPO-205ENST00000522122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.63□□□□□ -0.71
SYNPO-205ENST00000522122 IGKV2-29A2NJV5 120 aaPredicted RBP10.63□□□□□ -0.71
SYNPO-205ENST00000522122 ZFP36P26651 326 aaKnown RBP10.63□□□□□ -0.71
SYNPO-205ENST00000522122 A0A0J9YXV3 536 aa10.63□□□□□ -0.71
SYNPO-205ENST00000522122 IGHV4-30-2A0A087WSY4 118 aa10.62□□□□□ -0.71
SYNPO-205ENST00000522122 DNAH12Q6ZR08 3092 aa10.62□□□□□ -0.71
SYNPO-205ENST00000522122 DEFB136Q30KP8 78 aa10.62□□□□□ -0.71
SYNPO-205ENST00000522122 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
SYNPO-205ENST00000522122 Q9H8V8 135 aa10.62□□□□□ -0.71
SYNPO-205ENST00000522122 C9orf153Q5TBE3 101 aa10.61□□□□□ -0.71
SYNPO-205ENST00000522122 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
SYNPO-205ENST00000522122 ODF1Q14990 250 aa10.61□□□□□ -0.71
SYNPO-205ENST00000522122 TP73-AS1Q9UF72 201 aa10.61□□□□□ -0.71
SYNPO-205ENST00000522122 FBXL19-AS1Q494R0 122 aa10.61□□□□□ -0.71
SYNPO-205ENST00000522122 RBX1P62877 108 aa10.61□□□□□ -0.71
SYNPO-205ENST00000522122 U3KQK5 164 aa10.61□□□□□ -0.71
SYNPO-205ENST00000522122 LOXL1Q08397 574 aaPredicted RBP10.6□□□□□ -0.71
SYNPO-205ENST00000522122 NOP10Q9NPE3 64 aaKnown RBP10.6□□□□□ -0.71
SYNPO-205ENST00000522122 A4D1N5 150 aa10.6□□□□□ -0.71
SYNPO-205ENST00000522122 K7EMT4 169 aa10.6□□□□□ -0.71
SYNPO-205ENST00000522122 IGLV2-11P01706 119 aa10.6□□□□□ -0.71
SYNPO-205ENST00000522122 IFITM1P13164 125 aa10.6□□□□□ -0.71
SYNPO-205ENST00000522122 C10orf105Q8TEF2 133 aa10.6□□□□□ -0.71
SYNPO-205ENST00000522122 PRSS47A8MTI9 375 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 RPL39P62891 51 aaKnown RBP10.59□□□□□ -0.71
SYNPO-205ENST00000522122 WDR87Q6ZQQ6 2873 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 MED14OSP0DP75 135 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 SORL1Q92673 2214 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 G3V4G9 280 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 Q8N1Y9 231 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 SIRPDQ9H106 197 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 E9PLD3 99 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 SLURP1P55000 103 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 Q8NA96 180 aa10.59□□□□□ -0.71
SYNPO-205ENST00000522122 APRG1Q8IVJ8 170 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 TOMM6Q96B49 74 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 UBL5Q9BZL1 73 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 DSCAML1Q8TD84 2053 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 DEFB1P60022 68 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 BAALCQ8WXS3 180 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 PRO3102Q9H379 93 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 WFDC2Q14508 124 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 RNF152Q8N8N0 203 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 C15orf53Q8NAA6 179 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 SPANXDQ9BXN6 97 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 CCL24O00175 119 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 IGHG2P01859 326 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 TIMM17AQ99595 171 aa10.58□□□□□ -0.72
SYNPO-205ENST00000522122 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
SYNPO-205ENST00000522122 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
SYNPO-205ENST00000522122 ZNF80P51504 273 aaPredicted RBP10.57□□□□□ -0.72
SYNPO-205ENST00000522122 C22orf34Q6ZV56 151 aa10.57□□□□□ -0.72
SYNPO-205ENST00000522122 SLC25A29Q8N8R3 303 aa10.57□□□□□ -0.72
SYNPO-205ENST00000522122 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
SYNPO-205ENST00000522122 GPHB5Q86YW7 130 aa10.57□□□□□ -0.72
SYNPO-205ENST00000522122 F8WEM9 126 aa10.57□□□□□ -0.72
SYNPO-205ENST00000522122 ANKRD29Q8N6D5 301 aa10.57□□□□□ -0.72
SYNPO-205ENST00000522122 A0A096LPF7 62 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 HERV-K104P63124 156 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 PIEZO2Q9H5I5 2752 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 APOC4P55056 127 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 URB1-AS1Q96HZ7 61 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 IGHG4P01861 327 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 UBE2DNLQ8IWF7 75 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 HIVEP2P31629 2446 aa10.56□□□□□ -0.72
SYNPO-205ENST00000522122 C11orf86A6NJI1 115 aa10.55□□□□□ -0.72
SYNPO-205ENST00000522122 CRIP1P50238 77 aa10.55□□□□□ -0.72
SYNPO-205ENST00000522122 MYO9AB2RTY4 2548 aa10.55□□□□□ -0.72
SYNPO-205ENST00000522122 BAALC-AS2P0C853 105 aa10.55□□□□□ -0.72
SYNPO-205ENST00000522122 TEN1Q86WV5 123 aa10.55□□□□□ -0.72
SYNPO-205ENST00000522122 XCL1P47992 114 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 IGHV4OR15-8A0A075B7B6 117 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 A0A087WW49 117 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 CRLF1O75462 422 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 HAMPP81172 84 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 C2orf91Q6ZV80 131 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 HCFC1P51610 2035 aa10.54□□□□□ -0.72
SYNPO-205ENST00000522122 NAV3Q8IVL0 2385 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms