RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, human

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-210	ENST00000521122	TRBV6-1	A0A0K0K1D8	114 aa		4.63	□□□□□ -1.67
PVT1-210	ENST00000521122	FNDC10	F2Z333	226 aa		4.63	□□□□□ -1.67
PVT1-210	ENST00000521122		H3BP45	60 aa		4.63	□□□□□ -1.67
PVT1-210	ENST00000521122	MED6	O75586	246 aa		4.63	□□□□□ -1.67
PVT1-210	ENST00000521122	CSN1S1	P47710	185 aa		4.63	□□□□□ -1.67
PVT1-210	ENST00000521122	LYZL2	Q7Z4W2	148 aa		4.63	□□□□□ -1.67
PVT1-210	ENST00000521122	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.63	□□□□□ -1.67
PVT1-210	ENST00000521122	NUP35	Q8NFH5	326 aa		4.63	□□□□□ -1.67
PVT1-210	ENST00000521122	IGLV4-69	A0A075B6H9	119 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	IGHV1-24	A0A0C4DH33	117 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	PTGES3L	E9PB15	166 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122		M0QXV9	152 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	RPL28	P46779	137 aa	Known RBP	4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	RRAS2	P62070	204 aa	Predicted RBP	4.62	□□□□□ -1.67
PVT1-210	ENST00000521122		Q6ZRG5	221 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	OR1L4	Q8NGR5	311 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	S100A16	Q96FQ6	103 aa	Known RBP	4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	BCL7B	Q9BQE9	202 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	PRR13	Q9NZ81	148 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	NDUFA12	Q9UI09	145 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	RABL2B	Q9UNT1	228 aa		4.62	□□□□□ -1.67
PVT1-210	ENST00000521122	IGKV3OR2-268	A0A0C4DH90	116 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	SYNGR2	O43760	224 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	NUPR1	O60356	82 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	LGALS3	P17931	250 aa	Known RBP	4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	KRTAP10-10	P60014	251 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	KRTAP7-1	Q8IUC3	87 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	PFDN5	Q99471	154 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	SDHC	Q99643	169 aa	Predicted RBP	4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	SLIRP	Q9GZT3	109 aa	Known RBP	4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	TREM1	Q9NP99	234 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	FLVCR2	Q9UPI3	526 aa		4.61	□□□□□ -1.67
PVT1-210	ENST00000521122	S100A4	P26447	101 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	SFRP2	Q96HF1	295 aa		4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	MGST2	Q99735	147 aa		4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	CTDSP1	Q9GZU7	261 aa		4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	NDUFB11	Q9NX14	153 aa		4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	PSG8	Q9UQ74	426 aa		4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	C14orf166	Q9Y224	244 aa	Known RBP	4.6	□□□□□ -1.67
PVT1-210	ENST00000521122	NBEAP1	P0C6P0	100 aa		4.59	□□□□□ -1.67
PVT1-210	ENST00000521122	RNASE10	Q5GAN6	216 aa	Known RBP	4.59	□□□□□ -1.67
PVT1-210	ENST00000521122	CCDC59	Q9P031	241 aa	Known RBP	4.59	□□□□□ -1.67
PVT1-210	ENST00000521122	C19orf71	A6NCJ1	209 aa		4.58	□□□□□ -1.68
PVT1-210	ENST00000521122	GNAO1	P09471	354 aa		4.58	□□□□□ -1.68
PVT1-210	ENST00000521122	ZNF80	P51504	273 aa	Predicted RBP	4.58	□□□□□ -1.68
PVT1-210	ENST00000521122	DYNC2LI1	Q8TCX1	351 aa		4.58	□□□□□ -1.68
PVT1-210	ENST00000521122	PHYHIPL	Q96FC7	376 aa		4.58	□□□□□ -1.68
PVT1-210	ENST00000521122	IL36B	Q9NZH7	164 aa		4.58	□□□□□ -1.68
PVT1-210	ENST00000521122	OR5AC2	Q9NZP5	309 aa		4.58	□□□□□ -1.68
PVT1-210	ENST00000521122	RAB4B	P61018	213 aa		4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	SCGB2B2	Q4G0G5	96 aa		4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	MIC13	Q5XKP0	118 aa		4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	CAMK2N2	Q96S95	79 aa		4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	TMEM243	Q9BU79	118 aa		4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	MED28	Q9H204	178 aa		4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	TXNL4B	Q9NX01	149 aa	Known RBP	4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	KCNIP3	Q9Y2W7	256 aa		4.57	□□□□□ -1.68
PVT1-210	ENST00000521122	CD3D	P04234	171 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122	CAMLG	P49069	296 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122	TAS2R19	P59542	299 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122	C4orf48	Q5BLP8	95 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122		Q6Q795	121 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122	OR11H4	Q8NGC9	324 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122	OR5A1	Q8NGJ0	315 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122	SLC25A2	Q9BXI2	301 aa		4.56	□□□□□ -1.68
PVT1-210	ENST00000521122	ESD	P10768	282 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	SLC25A6	P12236	298 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	SDC2	P34741	201 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	XCL1	P47992	114 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	GABARAPL2	P60520	117 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	MXD1	Q05195	221 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	UBE2NL	Q5JXB2	153 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	FAM19A2	Q8N3H0	131 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	C3orf22	Q8N5N4	141 aa		4.55	□□□□□ -1.68
PVT1-210	ENST00000521122	GCG	P01275	180 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	MBP	P02686	304 aa	Predicted RBP	4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	METTL15P1	P0C7V9	234 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	RAN	P62826	216 aa	Known RBP	4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	ZFP1	Q6P2D0	407 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	OR2D3	Q8NGH3	330 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	FXYD5	Q96DB9	178 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	FAM167A-AS1	Q96KT0	104 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	PGLYRP4	Q96LB8	373 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	C2orf48	Q96LS8	159 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	NMES1	Q9C002	83 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	SCN3B	Q9NY72	215 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	PSENEN	Q9NZ42	101 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	GPR132	Q9UNW8	380 aa		4.54	□□□□□ -1.68
PVT1-210	ENST00000521122	IGKV3D-20	A0A0C4DH25	116 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122		H3BVH4	76 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122	UBE2L6	O14933	153 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122	BCL2L11	O43521	198 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122	BCE1	O60756	84 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122	ZNF56	Q15929	161 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122	TMEM14EP	Q6UXP3	125 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122	NRARP	Q7Z6K4	114 aa		4.53	□□□□□ -1.68
PVT1-210	ENST00000521122	LYRM2	Q9NU23	88 aa	Predicted RBP	4.53	□□□□□ -1.68

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