RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 HMSDA8MTL9 139 aa13.74□□□□□ -0.21
SNHG6-203ENST00000520944 EPM2AB3EWF7 344 aa13.74□□□□□ -0.21
SNHG6-203ENST00000520944 S100A9P06702 114 aaKnown RBP13.74□□□□□ -0.21
SNHG6-203ENST00000520944 LAGE3Q14657 143 aa13.74□□□□□ -0.21
SNHG6-203ENST00000520944 LINC01559Q495D7 138 aa13.74□□□□□ -0.21
SNHG6-203ENST00000520944 MBD3L1Q8WWY6 194 aa13.74□□□□□ -0.21
SNHG6-203ENST00000520944 TM2D2Q9BX73 214 aa13.74□□□□□ -0.21
SNHG6-203ENST00000520944 ZNF471Q9BX82 626 aaPredicted RBP13.74□□□□□ -0.21
SNHG6-203ENST00000520944 A0A1B0GV50 99 aa13.73□□□□□ -0.21
SNHG6-203ENST00000520944 M0R381 172 aa13.73□□□□□ -0.21
SNHG6-203ENST00000520944 XGP55808 180 aa13.73□□□□□ -0.21
SNHG6-203ENST00000520944 NTN5Q8WTR8 489 aaPredicted RBP13.73□□□□□ -0.21
SNHG6-203ENST00000520944 SFRP2Q96HF1 295 aa13.73□□□□□ -0.21
SNHG6-203ENST00000520944 A0A087WWL8 130 aa13.72□□□□□ -0.21
SNHG6-203ENST00000520944 PFDN1O60925 122 aa13.72□□□□□ -0.21
SNHG6-203ENST00000520944 LINC00694P0DN24 101 aa13.72□□□□□ -0.21
SNHG6-203ENST00000520944 ZFP82Q8N141 532 aa13.72□□□□□ -0.21
SNHG6-203ENST00000520944 Q9UF83 564 aa13.72□□□□□ -0.21
SNHG6-203ENST00000520944 FAT1Q14517 4588 aa13.71□□□□□ -0.21
SNHG6-203ENST00000520944 TRAV8-3A0A0A6YYJ7 113 aa13.71□□□□□ -0.21
SNHG6-203ENST00000520944 EIF5AP63241 154 aaKnown RBP13.71□□□□□ -0.21
SNHG6-203ENST00000520944 TOR2AQ5JU69 321 aa13.71□□□□□ -0.21
SNHG6-203ENST00000520944 BCL2L11O43521 198 aa13.7□□□□□ -0.22
SNHG6-203ENST00000520944 Q8N814 137 aa13.7□□□□□ -0.22
SNHG6-203ENST00000520944 URGCP-MRPS24S4R325 110 aa13.7□□□□□ -0.22
SNHG6-203ENST00000520944 H2AFB1P0C5Y9 115 aa13.69□□□□□ -0.22
SNHG6-203ENST00000520944 BAGE2Q86Y30 109 aa13.69□□□□□ -0.22
SNHG6-203ENST00000520944 Q8N3U1 123 aa13.69□□□□□ -0.22
SNHG6-203ENST00000520944 SCO2A0A1W2PP80 73 aa13.68□□□□□ -0.22
SNHG6-203ENST00000520944 DAZ4Q86SG3 579 aaKnown RBP13.68□□□□□ -0.22
SNHG6-203ENST00000520944 FRZBQ92765 325 aa13.68□□□□□ -0.22
SNHG6-203ENST00000520944 DAZ3Q9NR90 486 aaKnown RBP13.68□□□□□ -0.22
SNHG6-203ENST00000520944 TRBV10-1A0A0K0K1A3 114 aa13.67□□□□□ -0.22
SNHG6-203ENST00000520944 RPL36AP83881 106 aaKnown RBP13.67□□□□□ -0.22
SNHG6-203ENST00000520944 RPL36ALQ969Q0 106 aaKnown RBP13.67□□□□□ -0.22
SNHG6-203ENST00000520944 COX11Q9Y6N1 276 aa13.66□□□□□ -0.22
SNHG6-203ENST00000520944 KCNIP4Q6PIL6 250 aa13.65□□□□□ -0.22
SNHG6-203ENST00000520944 TMUB2Q71RG4 321 aa13.65□□□□□ -0.22
SNHG6-203ENST00000520944 MLST8Q9BVC4 326 aa13.65□□□□□ -0.22
SNHG6-203ENST00000520944 CXCL1P09341 107 aa13.64□□□□□ -0.23
SNHG6-203ENST00000520944 RPL19P84098 196 aaKnown RBP13.64□□□□□ -0.23
SNHG6-203ENST00000520944 Q5VSD8 79 aa13.64□□□□□ -0.23
SNHG6-203ENST00000520944 RMI2Q96E14 147 aa13.64□□□□□ -0.23
SNHG6-203ENST00000520944 TMEM70Q9BUB7 260 aa13.64□□□□□ -0.23
SNHG6-203ENST00000520944 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
SNHG6-203ENST00000520944 A0A087WX48 190 aa13.63□□□□□ -0.23
SNHG6-203ENST00000520944 RAB4BP61018 213 aa13.63□□□□□ -0.23
SNHG6-203ENST00000520944 PRR27Q6MZM9 219 aa13.63□□□□□ -0.23
SNHG6-203ENST00000520944 NIT1Q86X76 327 aa13.63□□□□□ -0.23
SNHG6-203ENST00000520944 SMR3BP02814 79 aaPredicted RBP13.62□□□□□ -0.23
SNHG6-203ENST00000520944 INAFM2P0DMQ5 153 aa13.62□□□□□ -0.23
SNHG6-203ENST00000520944 ELOBQ15370 118 aa13.62□□□□□ -0.23
SNHG6-203ENST00000520944 ZNF56Q15929 161 aa13.62□□□□□ -0.23
SNHG6-203ENST00000520944 SPANXN1Q5VSR9 72 aa13.62□□□□□ -0.23
SNHG6-203ENST00000520944 OR10AG1Q8NH19 301 aa13.62□□□□□ -0.23
SNHG6-203ENST00000520944 MANBALQ9NQG1 85 aa13.62□□□□□ -0.23
SNHG6-203ENST00000520944 VPS13BQ7Z7G8 4022 aa13.61□□□□□ -0.23
SNHG6-203ENST00000520944 FAM229AH3BQW9 127 aa13.61□□□□□ -0.23
SNHG6-203ENST00000520944 RPL35P42766 123 aaKnown RBP13.61□□□□□ -0.23
SNHG6-203ENST00000520944 UBE2D3P61077 147 aa13.61□□□□□ -0.23
SNHG6-203ENST00000520944 UBE2D2P62837 147 aa13.61□□□□□ -0.23
SNHG6-203ENST00000520944 EIF5AL1Q6IS14 154 aaKnown RBP13.61□□□□□ -0.23
SNHG6-203ENST00000520944 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.61□□□□□ -0.23
SNHG6-203ENST00000520944 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
SNHG6-203ENST00000520944 GNG13Q9P2W3 67 aa13.61□□□□□ -0.23
SNHG6-203ENST00000520944 KLK12Q9UKR0 248 aa13.61□□□□□ -0.23
SNHG6-203ENST00000520944 TEX46H3BTG2 121 aa13.6□□□□□ -0.23
SNHG6-203ENST00000520944 LECT2O14960 151 aa13.6□□□□□ -0.23
SNHG6-203ENST00000520944 RAB5CP51148 216 aa13.6□□□□□ -0.23
SNHG6-203ENST00000520944 OR10G8Q8NGN5 311 aa13.6□□□□□ -0.23
SNHG6-203ENST00000520944 SSBP4Q9BWG4 385 aaPredicted RBP13.6□□□□□ -0.23
SNHG6-203ENST00000520944 IGKV2D-24A0A075B6R9 120 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 MUC21A0A0G2JKD1 596 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 MUC21A0A140T8X8 626 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 F5H697 171 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 SNAI2O43623 268 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 OR5AL1P0C617 328 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 SSTP61278 116 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 CCL20P78556 96 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 HAMPP81172 84 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 WFDC2Q14508 124 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 BAALCQ8WXS3 180 aa13.59□□□□□ -0.23
SNHG6-203ENST00000520944 DNAH8Q96JB1 4490 aa13.58□□□□□ -0.24
SNHG6-203ENST00000520944 SMIM17P0DL12 118 aa13.58□□□□□ -0.24
SNHG6-203ENST00000520944 UBE2WQ96B02 151 aa13.58□□□□□ -0.24
SNHG6-203ENST00000520944 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
SNHG6-203ENST00000520944 C1QBP02746 253 aa13.57□□□□□ -0.24
SNHG6-203ENST00000520944 DAZAP1Q96EP5 407 aaKnown RBP13.57□□□□□ -0.24
SNHG6-203ENST00000520944 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.56□□□□□ -0.24
SNHG6-203ENST00000520944 TRBV6-8A0A0A6YYG3 113 aa13.56□□□□□ -0.24
SNHG6-203ENST00000520944 Q8N976 141 aa13.56□□□□□ -0.24
SNHG6-203ENST00000520944 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
SNHG6-203ENST00000520944 C11orf52Q96A22 123 aa13.56□□□□□ -0.24
SNHG6-203ENST00000520944 DERL1Q9BUN8 251 aa13.56□□□□□ -0.24
SNHG6-203ENST00000520944 HERC1Q15751 4861 aa13.56□□□□□ -0.24
SNHG6-203ENST00000520944 SRRM2Q9UQ35 2752 aaKnown RBP13.55□□□□□ -0.24
SNHG6-203ENST00000520944 Q0VG73 95 aa13.55□□□□□ -0.24
SNHG6-203ENST00000520944 CENPWQ5EE01 88 aa13.54□□□□□ -0.24
SNHG6-203ENST00000520944 DNAJC30Q96LL9 226 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms