RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 FAM74A4Q5TZK3 123 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 FAM104BQ5XKR9 115 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 AMN1Q8IY45 258 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 C14orf178Q8N769 122 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-208ENST00000520561 OR4C5Q8NGB2 326 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 DNHD1Q96M86 4753 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
CSMD1-208ENST00000520561 A0A087WWL8 130 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 RS1O15537 224 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 SPART-AS1P0CW21 52 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 DEFB130BP0DP73 79 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 DEFB130AP0DP74 79 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 DAD1P61803 113 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 SLAQ13239 276 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 JPT2Q9H910 190 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 DKK2Q9UBU2 259 aa6.4□□□□□ -1.38
CSMD1-208ENST00000520561 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 C1orf196B1AJZ1 125 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 F5H697 171 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 CIDEAO60543 219 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 TRGC2P03986 189 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 LINC00612Q8N6U2 182 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 MRAP2Q96G30 205 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 SAMD10Q9BYL1 202 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 MUC4Q99102 2169 aa6.39□□□□□ -1.39
CSMD1-208ENST00000520561 IGHV3-73A0A0B4J1V6 119 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 A0A0J9YWU9 116 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 H7C1H1 209 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 PPBPP02775 128 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 CRYGDP07320 174 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 NHLRC4P0CG21 123 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-208ENST00000520561 RAB4AP20338 218 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 CKS2P33552 79 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 KIAA1644Q3SXP7 199 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 MRPL51Q4U2R6 128 aaKnown RBP6.38□□□□□ -1.39
CSMD1-208ENST00000520561 ZFP2Q6ZN57 461 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 ORMDL3Q8N138 153 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 RNF185Q96GF1 192 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 C18orf15Q96N68 181 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 CELA1Q9UNI1 258 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 KIF25-AS1Q9Y6Z4 181 aa6.38□□□□□ -1.39
CSMD1-208ENST00000520561 TRGV4A0A0C4DH28 118 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 D6R8Y8 96 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 NCR2O95944 276 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 PPP1R17O96001 155 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 SRIP30626 198 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 RAB5BP61020 215 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 SUMO4Q6EEV6 95 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 POM121L12Q8N7R1 296 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 ZNF479Q96JC4 524 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 PRELID3AQ96N28 172 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 LAMTOR2Q9Y2Q5 125 aa6.37□□□□□ -1.39
CSMD1-208ENST00000520561 TRAV26-2A0A0B4J265 109 aa6.36□□□□□ -1.39
CSMD1-208ENST00000520561 SMKR1H3BMG3 65 aa6.36□□□□□ -1.39
CSMD1-208ENST00000520561 ATP5G1P05496 136 aa6.36□□□□□ -1.39
CSMD1-208ENST00000520561 LINC00315P59091 139 aa6.36□□□□□ -1.39
CSMD1-208ENST00000520561 OR10J3Q5JRS4 329 aa6.36□□□□□ -1.39
CSMD1-208ENST00000520561 U3KQK5 164 aa6.36□□□□□ -1.39
CSMD1-208ENST00000520561 NBEAL1Q6ZS30 2694 aa6.36□□□□□ -1.39
CSMD1-208ENST00000520561 K7EQD1 137 aa6.35□□□□□ -1.39
CSMD1-208ENST00000520561 PHOX2AO14813 284 aa6.35□□□□□ -1.39
CSMD1-208ENST00000520561 C11orf45Q8TAV5 145 aa6.35□□□□□ -1.39
CSMD1-208ENST00000520561 ALKBH7Q9BT30 221 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-208ENST00000520561 MAP1LC3AQ9H492 121 aa6.35□□□□□ -1.39
CSMD1-208ENST00000520561 EDA2RQ9HAV5 297 aa6.35□□□□□ -1.39
CSMD1-208ENST00000520561 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
CSMD1-208ENST00000520561 NPYP01303 97 aa6.34□□□□□ -1.39
CSMD1-208ENST00000520561 HTN3P15516 51 aa6.34□□□□□ -1.39
CSMD1-208ENST00000520561 GATA1P15976 413 aaPredicted RBP6.34□□□□□ -1.39
CSMD1-208ENST00000520561 RHOHQ15669 191 aa6.34□□□□□ -1.39
CSMD1-208ENST00000520561 C12orf74Q32Q52 190 aa6.34□□□□□ -1.39
CSMD1-208ENST00000520561 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
CSMD1-208ENST00000520561 TRBV10-1A0A0K0K1A3 114 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 F5H768 121 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 M0QY20 66 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BKO60814 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BJP06899 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BOP23527 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BBP33778 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BDP58876 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 NANOS2P60321 138 aaKnown RBP6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BCP62807 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 FHL2Q14192 279 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST2H2BEQ16778 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-208ENST00000520561 Q6ZTC4 211 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 NRACQ8N912 160 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BHQ93079 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 RPL39LQ96EH5 51 aaKnown RBP6.33□□□□□ -1.4
CSMD1-208ENST00000520561 DNAJC30Q96LL9 226 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BNQ99877 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 HIST1H2BMQ99879 126 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 PRO0255Q9UI72 69 aa6.33□□□□□ -1.4
CSMD1-208ENST00000520561 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms