RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 FAM231CP0DMU5 169 aa2□□□□□ -2.09
MCF2-208ENST00000519895 Q5BKY6 102 aa2□□□□□ -2.09
MCF2-208ENST00000519895 ACTL10Q5JWF8 245 aa2□□□□□ -2.09
MCF2-208ENST00000519895 CLLU1Q5K131 121 aa2□□□□□ -2.09
MCF2-208ENST00000519895 PAPPA-AS1Q5QFB9 102 aa2□□□□□ -2.09
MCF2-208ENST00000519895 FAM162BQ5T6X4 162 aa2□□□□□ -2.09
MCF2-208ENST00000519895 GFI1BQ5VTD9 330 aa2□□□□□ -2.09
MCF2-208ENST00000519895 MORN5Q5VZ52 161 aa2□□□□□ -2.09
MCF2-208ENST00000519895 FAM122CQ6P4D5 195 aa2□□□□□ -2.09
MCF2-208ENST00000519895 OSTCQ9NRP0 149 aa2□□□□□ -2.09
MCF2-208ENST00000519895 PAIP2BQ9ULR5 123 aaKnown RBP2□□□□□ -2.09
MCF2-208ENST00000519895 MRPS16Q9Y3D3 137 aaKnown RBP2□□□□□ -2.09
MCF2-208ENST00000519895 B4DEV8 164 aa2□□□□□ -2.09
MCF2-208ENST00000519895 GGTLC3B5MD39 225 aa2□□□□□ -2.09
MCF2-208ENST00000519895 KRBOX1C9JBD0 128 aa2□□□□□ -2.09
MCF2-208ENST00000519895 M0R381 172 aa2□□□□□ -2.09
MCF2-208ENST00000519895 PHOX2AO14813 284 aa2□□□□□ -2.09
MCF2-208ENST00000519895 PPP1R2P9O14990 202 aa2□□□□□ -2.09
MCF2-208ENST00000519895 SIVA1O15304 175 aa2□□□□□ -2.09
MCF2-208ENST00000519895 OR7C2O60412 319 aa2□□□□□ -2.09
MCF2-208ENST00000519895 NCR2O95944 276 aa2□□□□□ -2.09
MCF2-208ENST00000519895 PPP1R17O96001 155 aa2□□□□□ -2.09
MCF2-208ENST00000519895 ATP5G1P05496 136 aa2□□□□□ -2.09
MCF2-208ENST00000519895 ATP5G3P48201 142 aa2□□□□□ -2.09
MCF2-208ENST00000519895 DEFA5Q01523 94 aa2□□□□□ -2.09
MCF2-208ENST00000519895 ICAM4Q14773 271 aa2□□□□□ -2.09
MCF2-208ENST00000519895 ZNF124Q15973 351 aa2□□□□□ -2.09
MCF2-208ENST00000519895 C11orf45Q8TAV5 145 aa2□□□□□ -2.09
MCF2-208ENST00000519895 SFRP2Q96HF1 295 aa2□□□□□ -2.09
MCF2-208ENST00000519895 ZNF471Q9BX82 626 aaPredicted RBP2□□□□□ -2.09
MCF2-208ENST00000519895 S4R3C0 116 aa2□□□□□ -2.09
MCF2-208ENST00000519895 TRAV5A0A0B4J249 113 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 KNCNA6PVL3 124 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 K7EMI3 77 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 IGLC6P0CF74 106 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 GATA2P23769 480 aaPredicted RBP1.99□□□□□ -2.09
MCF2-208ENST00000519895 CTRLP40313 264 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 AKR1C3P42330 323 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 RAB4BP61018 213 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 MEF2BQ02080 365 aaPredicted RBP1.99□□□□□ -2.09
MCF2-208ENST00000519895 PEA15Q15121 130 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 C12orf74Q32Q52 190 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 TTC32Q5I0X7 151 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 C10orf91Q5T1B1 145 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 TEX261Q6UWH6 196 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 ZFP82Q8N141 532 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 TMEM242Q9NWH2 141 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 RPH3ALQ9UNE2 315 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 A0A087WWC5 75 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 KRTAP23-1A1A580 65 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 CCL25O15444 150 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 ZNF207O43670 478 aaKnown RBP1.99□□□□□ -2.09
MCF2-208ENST00000519895 S100A8P05109 93 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 GATA1P15976 413 aaPredicted RBP1.99□□□□□ -2.09
MCF2-208ENST00000519895 LRRC37A5PQ49AS3 106 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 ATP5L2Q7Z4Y8 100 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 HSD17B11Q8NBQ5 300 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 PGLYRP4Q96LB8 373 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 GTSF1LQ9H1H1 148 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 SLC25A22Q9H936 323 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 CBY1Q9Y3M2 126 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 YTHDF2Q9Y5A9 579 aaKnown RBP1.99□□□□□ -2.09
MCF2-208ENST00000519895 DNAH5Q8TE73 4624 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 FLG2Q5D862 2391 aaPredicted RBP1.99□□□□□ -2.09
MCF2-208ENST00000519895 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 LINC00862A6NCI5 91 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 RBFOX3A6NFN3 312 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 SNURFLB1AK76 121 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 GPX1P07203 203 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 PYYP10082 97 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 EMP1P54849 157 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 SMAGPQ0VAQ4 97 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 LAGE3Q14657 143 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 LINC00052Q96N35 136 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 LAMTOR2Q9Y2Q5 125 aa1.99□□□□□ -2.09
MCF2-208ENST00000519895 APOBP04114 4563 aaKnown RBP1.98□□□□□ -2.09
MCF2-208ENST00000519895 GAGE12JA6NER3 117 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 PRAC2D3DTV9 90 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 IGLV2-8P01709 118 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 IGHV3-48P01763 117 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 MGST1P10620 155 aaKnown RBP1.98□□□□□ -2.09
MCF2-208ENST00000519895 ASIPP42127 132 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 UBE2G1P62253 170 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 VAMP3Q15836 100 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 GCSAMLQ5JQS6 135 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 GDF5OSQ5U4N7 250 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 NFE4Q86UQ8 179 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 LINC00479Q96M42 142 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 LINC01587Q99440 93 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 PRO0255Q9UI72 69 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 PKIGQ9Y2B9 76 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 A0A0J9YWU9 116 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 H7C1H1 209 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 SRP19P09132 144 aaKnown RBP1.98□□□□□ -2.09
MCF2-208ENST00000519895 DAD1P61803 113 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 Q6ZR54 194 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 Q6ZSN1 163 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 C10orf126Q8N4M7 172 aa1.98□□□□□ -2.09
MCF2-208ENST00000519895 PHLDA1Q8WV24 401 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms