RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 DNHD1Q96M86 4753 aa12.54□□□□□ -0.4
IGHV3-52-201ENST00000519770 A0A087WWL8 130 aa12.54□□□□□ -0.4
IGHV3-52-201ENST00000519770 RS1O15537 224 aa12.54□□□□□ -0.4
IGHV3-52-201ENST00000519770 RPS10P46783 165 aaKnown RBP12.54□□□□□ -0.4
IGHV3-52-201ENST00000519770 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.54□□□□□ -0.4
IGHV3-52-201ENST00000519770 FRZBQ92765 325 aa12.54□□□□□ -0.4
IGHV3-52-201ENST00000519770 YPEL4Q96NS1 127 aa12.54□□□□□ -0.4
IGHV3-52-201ENST00000519770 MUC4Q99102 2169 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 COLCA2A8K830 154 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 RAB5AP20339 215 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 ZNF56Q15929 161 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 ZFP2Q6ZN57 461 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 C11orf45Q8TAV5 145 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 TRAPPC1Q9Y5R8 145 aa12.53□□□□□ -0.4
IGHV3-52-201ENST00000519770 TRGV4A0A0C4DH28 118 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 APCSP02743 223 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 GATD1Q8NB37 220 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 C18orf15Q96N68 181 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 JPT2Q9H910 190 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 U3KQK5 164 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
IGHV3-52-201ENST00000519770 ATP5G1P05496 136 aa12.51□□□□□ -0.41
IGHV3-52-201ENST00000519770 FABP9Q0Z7S8 132 aa12.51□□□□□ -0.41
IGHV3-52-201ENST00000519770 FAM104BQ5XKR9 115 aa12.51□□□□□ -0.41
IGHV3-52-201ENST00000519770 TMEM136Q6ZRR5 245 aa12.51□□□□□ -0.41
IGHV3-52-201ENST00000519770 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
IGHV3-52-201ENST00000519770 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
IGHV3-52-201ENST00000519770 H7C1H1 209 aa12.5□□□□□ -0.41
IGHV3-52-201ENST00000519770 CRYGDP07320 174 aa12.5□□□□□ -0.41
IGHV3-52-201ENST00000519770 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
IGHV3-52-201ENST00000519770 SAMD10Q9BYL1 202 aa12.5□□□□□ -0.41
IGHV3-52-201ENST00000519770 MRPL18Q9H0U6 180 aaKnown RBP12.5□□□□□ -0.41
IGHV3-52-201ENST00000519770 SLAQ13239 276 aa12.49□□□□□ -0.41
IGHV3-52-201ENST00000519770 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
IGHV3-52-201ENST00000519770 PPBPP02775 128 aa12.48□□□□□ -0.41
IGHV3-52-201ENST00000519770 HTN3P15516 51 aa12.48□□□□□ -0.41
IGHV3-52-201ENST00000519770 RAB4AP20338 218 aa12.48□□□□□ -0.41
IGHV3-52-201ENST00000519770 CKS2P33552 79 aa12.48□□□□□ -0.41
IGHV3-52-201ENST00000519770 ZNF479Q96JC4 524 aa12.48□□□□□ -0.41
IGHV3-52-201ENST00000519770 PPP1R17O96001 155 aa12.47□□□□□ -0.41
IGHV3-52-201ENST00000519770 C12orf74Q32Q52 190 aa12.47□□□□□ -0.41
IGHV3-52-201ENST00000519770 KIF25-AS1Q9Y6Z4 181 aa12.47□□□□□ -0.41
IGHV3-52-201ENST00000519770 NBEAL2Q6ZNJ1 2754 aa12.46□□□□□ -0.41
IGHV3-52-201ENST00000519770 F5H768 121 aa12.46□□□□□ -0.41
IGHV3-52-201ENST00000519770 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.41
IGHV3-52-201ENST00000519770 ORMDL3Q8N138 153 aa12.46□□□□□ -0.41
IGHV3-52-201ENST00000519770 POM121L12Q8N7R1 296 aa12.46□□□□□ -0.41
IGHV3-52-201ENST00000519770 NANOS2P60321 138 aaKnown RBP12.45□□□□□ -0.42
IGHV3-52-201ENST00000519770 RNF185Q96GF1 192 aa12.45□□□□□ -0.42
IGHV3-52-201ENST00000519770 PRADC1Q9BSG0 188 aa12.45□□□□□ -0.42
IGHV3-52-201ENST00000519770 SUMO4Q6EEV6 95 aa12.44□□□□□ -0.42
IGHV3-52-201ENST00000519770 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
IGHV3-52-201ENST00000519770 HHLA3Q9XRX5 114 aa12.44□□□□□ -0.42
IGHV3-52-201ENST00000519770 TRBV6-4A0A1B0GX49 114 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 D6R8Y8 96 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 TRGC2P03986 189 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 LINC00315P59091 139 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 FHL2Q14192 279 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 RHOHQ15669 191 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 KIAA1644Q3SXP7 199 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 PRO0255Q9UI72 69 aa12.43□□□□□ -0.42
IGHV3-52-201ENST00000519770 TRAV10A0A0B4J240 114 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 TRAV26-2A0A0B4J265 109 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 K7EQD1 137 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 OR10J3Q5JRS4 329 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 Q6ZTC4 211 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 PRELID3AQ96N28 172 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 LAMTOR2Q9Y2Q5 125 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 TNFRSF18Q9Y5U5 241 aa12.42□□□□□ -0.42
IGHV3-52-201ENST00000519770 DEFB131BA0A096LNP1 70 aa12.41□□□□□ -0.42
IGHV3-52-201ENST00000519770 TRBV10-1A0A0K0K1A3 114 aa12.41□□□□□ -0.42
IGHV3-52-201ENST00000519770 C1orf196B1AJZ1 125 aa12.41□□□□□ -0.42
IGHV3-52-201ENST00000519770 PAX4O43316 350 aa12.41□□□□□ -0.42
IGHV3-52-201ENST00000519770 NCR2O95944 276 aa12.41□□□□□ -0.42
IGHV3-52-201ENST00000519770 DNAJC30Q96LL9 226 aa12.41□□□□□ -0.42
IGHV3-52-201ENST00000519770 SMKR1H3BMG3 65 aa12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 M0QY20 66 aa12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 PHOX2AO14813 284 aa12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 SLC25A29Q8N8R3 303 aa12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 NIT2Q9NQR4 276 aa12.4□□□□□ -0.42
IGHV3-52-201ENST00000519770 HOXA5P20719 270 aa12.39□□□□□ -0.43
IGHV3-52-201ENST00000519770 SRIP30626 198 aa12.39□□□□□ -0.43
IGHV3-52-201ENST00000519770 CRYBA4P53673 196 aa12.39□□□□□ -0.43
IGHV3-52-201ENST00000519770 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
IGHV3-52-201ENST00000519770 TNFRSF6BO95407 300 aa12.38□□□□□ -0.43
IGHV3-52-201ENST00000519770 Q6ZSN1 163 aa12.38□□□□□ -0.43
IGHV3-52-201ENST00000519770 MAP1LC3AQ9H492 121 aa12.38□□□□□ -0.43
IGHV3-52-201ENST00000519770 TRAV26-1A0A087WT03 109 aa12.37□□□□□ -0.43
IGHV3-52-201ENST00000519770 RAB5BP61020 215 aa12.37□□□□□ -0.43
IGHV3-52-201ENST00000519770 C20orf78Q9BR46 151 aa12.37□□□□□ -0.43
IGHV3-52-201ENST00000519770 ALKBH7Q9BT30 221 aaPredicted RBP12.37□□□□□ -0.43
IGHV3-52-201ENST00000519770 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
IGHV3-52-201ENST00000519770 A0A0J9YY99 117 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms