RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 SFRP2Q96HF1 295 aa16.91■□□□□ 0.3
VEGFA-220ENST00000519767 TRAV8-3A0A0A6YYJ7 113 aa16.9■□□□□ 0.3
VEGFA-220ENST00000519767 C14orf178Q8N769 122 aaPredicted RBP16.9■□□□□ 0.3
VEGFA-220ENST00000519767 Q8N814 137 aa16.9■□□□□ 0.3
VEGFA-220ENST00000519767 MBD3L1Q8WWY6 194 aa16.9■□□□□ 0.3
VEGFA-220ENST00000519767 AKR1C3P42330 323 aa16.89■□□□□ 0.29
VEGFA-220ENST00000519767 SFT2D1Q8WV19 159 aa16.89■□□□□ 0.29
VEGFA-220ENST00000519767 FRZBQ92765 325 aa16.89■□□□□ 0.29
VEGFA-220ENST00000519767 Q9UF83 564 aa16.89■□□□□ 0.29
VEGFA-220ENST00000519767 SRRM2Q9UQ35 2752 aaKnown RBP16.89■□□□□ 0.29
VEGFA-220ENST00000519767 HMSDA8MTL9 139 aa16.88■□□□□ 0.29
VEGFA-220ENST00000519767 PAGE4O60829 102 aa16.88■□□□□ 0.29
VEGFA-220ENST00000519767 FAM74A4Q5TZK3 123 aa16.88■□□□□ 0.29
VEGFA-220ENST00000519767 ZFP82Q8N141 532 aa16.88■□□□□ 0.29
VEGFA-220ENST00000519767 TMEM70Q9BUB7 260 aa16.88■□□□□ 0.29
VEGFA-220ENST00000519767 A0A0D9SG52 128 aa16.87■□□□□ 0.29
VEGFA-220ENST00000519767 SMLR1H3BR10 107 aa16.87■□□□□ 0.29
VEGFA-220ENST00000519767 TMSB15BA0A087X1C1 80 aa16.86■□□□□ 0.29
VEGFA-220ENST00000519767 M0R381 172 aa16.86■□□□□ 0.29
VEGFA-220ENST00000519767 COX11Q9Y6N1 276 aa16.86■□□□□ 0.29
VEGFA-220ENST00000519767 A0A087WWL8 130 aa16.85■□□□□ 0.29
VEGFA-220ENST00000519767 TRBV10-1A0A0K0K1A3 114 aa16.85■□□□□ 0.29
VEGFA-220ENST00000519767 FAM213BQ8TBF2 198 aa16.85■□□□□ 0.29
VEGFA-220ENST00000519767 URGCP-MRPS24S4R325 110 aa16.85■□□□□ 0.29
VEGFA-220ENST00000519767 EIF5AP63241 154 aaKnown RBP16.84■□□□□ 0.29
VEGFA-220ENST00000519767 DAZ4Q86SG3 579 aaKnown RBP16.84■□□□□ 0.29
VEGFA-220ENST00000519767 DAZ3Q9NR90 486 aaKnown RBP16.84■□□□□ 0.29
VEGFA-220ENST00000519767 KANTRA0A1W2PQU2 76 aa16.83■□□□□ 0.28
VEGFA-220ENST00000519767 PFDN1O60925 122 aa16.83■□□□□ 0.28
VEGFA-220ENST00000519767 INAFM2P0DMQ5 153 aa16.83■□□□□ 0.28
VEGFA-220ENST00000519767 Q5VSD8 79 aa16.83■□□□□ 0.28
VEGFA-220ENST00000519767 Q8N3U1 123 aa16.83■□□□□ 0.28
VEGFA-220ENST00000519767 C1QBP02746 253 aa16.82■□□□□ 0.28
VEGFA-220ENST00000519767 RMI2Q96E14 147 aa16.82■□□□□ 0.28
VEGFA-220ENST00000519767 ZNF471Q9BX82 626 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-220ENST00000519767 FAT1Q14517 4588 aa16.82■□□□□ 0.28
VEGFA-220ENST00000519767 FAM229AH3BQW9 127 aa16.81■□□□□ 0.28
VEGFA-220ENST00000519767 CXCL1P09341 107 aa16.81■□□□□ 0.28
VEGFA-220ENST00000519767 H2AFB1P0C5Y9 115 aa16.81■□□□□ 0.28
VEGFA-220ENST00000519767 RPL36AP83881 106 aaKnown RBP16.81■□□□□ 0.28
VEGFA-220ENST00000519767 NIT1Q86X76 327 aa16.81■□□□□ 0.28
VEGFA-220ENST00000519767 BAGE2Q86Y30 109 aa16.81■□□□□ 0.28
VEGFA-220ENST00000519767 RPL36ALQ969Q0 106 aaKnown RBP16.81■□□□□ 0.28
VEGFA-220ENST00000519767 BCL2L11O43521 198 aa16.8■□□□□ 0.28
VEGFA-220ENST00000519767 MLST8Q9BVC4 326 aa16.8■□□□□ 0.28
VEGFA-220ENST00000519767 TRBV7-3A0A075B6L6 115 aa16.79■□□□□ 0.28
VEGFA-220ENST00000519767 SMR3BP02814 79 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-220ENST00000519767 ELOBQ15370 118 aa16.79■□□□□ 0.28
VEGFA-220ENST00000519767 TMUB2Q71RG4 321 aa16.79■□□□□ 0.28
VEGFA-220ENST00000519767 CHCHD7Q9BUK0 85 aa16.79■□□□□ 0.28
VEGFA-220ENST00000519767 RAB4BP61018 213 aa16.78■□□□□ 0.28
VEGFA-220ENST00000519767 KCNIP4Q6PIL6 250 aa16.78■□□□□ 0.28
VEGFA-220ENST00000519767 DMBT1Q9UGM3 2413 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-220ENST00000519767 A0A087WX48 190 aa16.77■□□□□ 0.28
VEGFA-220ENST00000519767 A0A1B0GV50 99 aa16.77■□□□□ 0.28
VEGFA-220ENST00000519767 SCO2A0A1W2PP80 73 aa16.77■□□□□ 0.28
VEGFA-220ENST00000519767 UBE2D3P61077 147 aa16.77■□□□□ 0.28
VEGFA-220ENST00000519767 UBE2D2P62837 147 aa16.77■□□□□ 0.28
VEGFA-220ENST00000519767 OR10G8Q8NGN5 311 aa16.77■□□□□ 0.28
VEGFA-220ENST00000519767 SSBP4Q9BWG4 385 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-220ENST00000519767 KLK12Q9UKR0 248 aa16.75■□□□□ 0.27
VEGFA-220ENST00000519767 OR5AL1P0C617 328 aa16.74■□□□□ 0.27
VEGFA-220ENST00000519767 WFDC2Q14508 124 aa16.74■□□□□ 0.27
VEGFA-220ENST00000519767 Q8N976 141 aa16.74■□□□□ 0.27
VEGFA-220ENST00000519767 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.74■□□□□ 0.27
VEGFA-220ENST00000519767 OR10AG1Q8NH19 301 aa16.74■□□□□ 0.27
VEGFA-220ENST00000519767 SNAI2O43623 268 aa16.73■□□□□ 0.27
VEGFA-220ENST00000519767 RPL19P84098 196 aaKnown RBP16.73■□□□□ 0.27
VEGFA-220ENST00000519767 BAALCQ8WXS3 180 aa16.73■□□□□ 0.27
VEGFA-220ENST00000519767 Q0VG73 95 aa16.72■□□□□ 0.27
VEGFA-220ENST00000519767 SPANXN1Q5VSR9 72 aa16.72■□□□□ 0.27
VEGFA-220ENST00000519767 PRR27Q6MZM9 219 aa16.72■□□□□ 0.27
VEGFA-220ENST00000519767 MANBALQ9NQG1 85 aa16.72■□□□□ 0.27
VEGFA-220ENST00000519767 FAM30AQ9NZY2 134 aa16.72■□□□□ 0.27
VEGFA-220ENST00000519767 VPS13BQ7Z7G8 4022 aa16.72■□□□□ 0.27
VEGFA-220ENST00000519767 IGKV2D-24A0A075B6R9 120 aa16.71■□□□□ 0.27
VEGFA-220ENST00000519767 TRAV1-1A0A0B4J248 108 aa16.71■□□□□ 0.27
VEGFA-220ENST00000519767 LECT2O14960 151 aa16.71■□□□□ 0.27
VEGFA-220ENST00000519767 RPL35P42766 123 aaKnown RBP16.71■□□□□ 0.27
VEGFA-220ENST00000519767 RAB5CP51148 216 aa16.71■□□□□ 0.27
VEGFA-220ENST00000519767 ZNF56Q15929 161 aa16.71■□□□□ 0.27
VEGFA-220ENST00000519767 TRBV6-8A0A0A6YYG3 113 aa16.7■□□□□ 0.26
VEGFA-220ENST00000519767 TMEM262E9PQX1 116 aa16.7■□□□□ 0.26
VEGFA-220ENST00000519767 EIF5AL1Q6IS14 154 aaKnown RBP16.7■□□□□ 0.26
VEGFA-220ENST00000519767 UBE2WQ96B02 151 aa16.7■□□□□ 0.26
VEGFA-220ENST00000519767 F5H697 171 aa16.69■□□□□ 0.26
VEGFA-220ENST00000519767 TEX46H3BTG2 121 aa16.69■□□□□ 0.26
VEGFA-220ENST00000519767 HAMPP81172 84 aa16.69■□□□□ 0.26
VEGFA-220ENST00000519767 NEXN-AS1Q8NBZ9 246 aa16.69■□□□□ 0.26
VEGFA-220ENST00000519767 PKIAP61925 76 aa16.68■□□□□ 0.26
VEGFA-220ENST00000519767 ATRAIDQ6UW56 229 aa16.68■□□□□ 0.26
VEGFA-220ENST00000519767 C11orf52Q96A22 123 aa16.68■□□□□ 0.26
VEGFA-220ENST00000519767 GNG13Q9P2W3 67 aa16.68■□□□□ 0.26
VEGFA-220ENST00000519767 HERC1Q15751 4861 aa16.67■□□□□ 0.26
VEGFA-220ENST00000519767 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-220ENST00000519767 SMIM17P0DL12 118 aa16.67■□□□□ 0.26
VEGFA-220ENST00000519767 CCL20P78556 96 aa16.67■□□□□ 0.26
VEGFA-220ENST00000519767 TMEM97Q5BJF2 176 aa16.67■□□□□ 0.26
VEGFA-220ENST00000519767 Q6ZSA8 131 aa16.67■□□□□ 0.26
VEGFA-220ENST00000519767 RBFOX3A6NFN3 312 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms