RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NPVFQ9HCQ7 196 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 LINC00588Q9Y4M8 146 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 GPR179Q6PRD1 2367 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 FLNBO75369 2602 aaKnown RBP1.95□□□□□ -2.1
VPS13B-207ENST00000518569 MYH8P13535 1937 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 PLXND1Q9Y4D7 1925 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 DSPP15924 2871 aaKnown RBP1.95□□□□□ -2.1
VPS13B-207ENST00000518569 LOC285556D6RIA3 1793 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 TECTAO75443 2155 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 ZZEF1O43149 2961 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 ZFYVE26Q68DK2 2539 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 CACNA1HO95180 2353 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 MYH11P35749 1972 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 SCN10AQ9Y5Y9 1956 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 MYO7AQ13402 2215 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 FOCADQ5VW36 1801 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 ASH1LQ9NR48 2969 aaKnown RBP1.94□□□□□ -2.1
VPS13B-207ENST00000518569 CEP250Q9BV73 2442 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 MUC21A0A0G2JKD1 596 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 A6NED7 52 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 OOSP1A8MZH6 123 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 ATOX1O00244 68 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 GNGT2O14610 69 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 TIMM17BO60830 172 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 UBL3O95164 117 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 SFT2D2O95562 160 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 IGLV3-25P01717 112 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 IL5P05113 134 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 CCL4P13236 92 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 DYNLT1P63172 113 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 C10orf91Q5T1B1 145 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 PRR9Q5T870 116 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 MIC13Q5XKP0 118 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 ALKAL2Q6UX46 152 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 SOSTDC1Q6X4U4 206 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 RPRMLQ8N4K4 120 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 CLDND2Q8NHS1 167 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 CHCHD1Q96BP2 118 aaKnown RBP1.94□□□□□ -2.1
VPS13B-207ENST00000518569 S100A16Q96FQ6 103 aaKnown RBP1.94□□□□□ -2.1
VPS13B-207ENST00000518569 PLA2G12AQ9BZM1 189 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 C16orf95Q9H693 158 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 LY96Q9Y6Y9 160 aa1.94□□□□□ -2.1
VPS13B-207ENST00000518569 GVINP1Q7Z2Y8 2422 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 MYH7BA7E2Y1 1941 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 TANC1Q9C0D5 1861 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 SHROOM3Q8TF72 1996 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 IGLC7A0M8Q6 106 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 TMEM235A6NFC5 223 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 ZNF705FA8MVS1 300 aaPredicted RBP1.93□□□□□ -2.1
VPS13B-207ENST00000518569 M0R233 179 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 MT-ATP8P03928 68 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 SHBGP04278 402 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 IGKV1-16P04430 117 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 CD24P25063 80 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 PEBP1P30086 187 aaKnown RBP1.93□□□□□ -2.1
VPS13B-207ENST00000518569 MPV17P39210 176 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 CMC4P56277 68 aaPredicted RBP1.93□□□□□ -2.1
VPS13B-207ENST00000518569 SS18Q15532 418 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 SPANXN1Q5VSR9 72 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 UNQ5815/PRO19632Q6UWF5 114 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 C16orf47Q6ZP98 133 aaPredicted RBP1.93□□□□□ -2.1
VPS13B-207ENST00000518569 Q6ZQT7 251 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 LINC00471Q8N535 108 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 PFN4Q8NHR9 129 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 CIRBP-AS1Q8TBR5 109 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 SMCR5Q8TEV8 140 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 CLEC2BQ92478 149 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 MRPS24Q96EL2 167 aaKnown RBP1.93□□□□□ -2.1
VPS13B-207ENST00000518569 SMIM7Q9BQ49 75 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 PMCHL2Q9BQD1 86 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 UPK3BQ9BT76 320 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 ST20Q9HBF5 79 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 CACFD1Q9UGQ2 172 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 TIMM9Q9Y5J7 89 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 EP300Q09472 2414 aaPredicted RBP1.93□□□□□ -2.1
VPS13B-207ENST00000518569 MIA3Q5JRA6 1907 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 SPEGQ15772 3267 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 FANCMQ8IYD8 2048 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 TET1Q8NFU7 2136 aa1.93□□□□□ -2.1
VPS13B-207ENST00000518569 MYH7P12883 1935 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 TICRRQ7Z2Z1 1910 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 ITPR1Q14643 2758 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 TENM4Q6N022 2769 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 IGHV3-73A0A0B4J1V6 119 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 TRAV2A0A0B4J234 112 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 IGHV1-24A0A0C4DH33 117 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 KANTRA0A1W2PQU2 76 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 A6NIN4 97 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 A8MUU9 505 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 H3BRM9 83 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 NDUFC1O43677 76 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 LY6HO94772 140 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 CCL3P10147 92 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 CBLN1P23435 193 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 XCL1P47992 114 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 FXYD2P54710 66 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 SPRNQ5BIV9 151 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 PATE2Q6UY27 113 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 SLC25A26Q70HW3 274 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms