RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 PMVKQ15126 192 aa7.36□□□□□ -1.23
ARFGEF1-203ENST00000518230 CITED1Q99966 193 aa7.36□□□□□ -1.23
ARFGEF1-203ENST00000518230 COL6A6A6NMZ7 2263 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 RNASE3P12724 160 aaKnown RBP7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 AMELXQ99217 191 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 BEX4Q9NWD9 120 aaPredicted RBP7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 VPS13CQ709C8 3753 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 SPTAN1Q13813 2472 aaKnown RBP7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 A0A087WWL8 130 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 TRAV2A0A0B4J234 112 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 TRAV21A0A0B4J279 112 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 TMEM262E9PQX1 116 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 J3QQQ9 107 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 M0R1W7 72 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 ZFP36P26651 326 aaKnown RBP7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 EBI3Q14213 229 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 NTN5Q8WTR8 489 aaPredicted RBP7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 MRPL53Q96EL3 112 aaKnown RBP7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 VCX2Q9H322 139 aa7.35□□□□□ -1.23
ARFGEF1-203ENST00000518230 IGHV4-39P01824 125 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 RPL11P62913 178 aaKnown RBP7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 TIMD4Q96H15 378 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 TEX49A0A1B0GTD5 131 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 F5H697 171 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 CCDC179H3BU77 68 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 IGHV3-33P01772 117 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 GAGE2EQ4V326 116 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 C1orf122Q6ZSJ8 110 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 Q8N1Y9 231 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 ITLN2Q8WWU7 325 aaPredicted RBP7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 GAGE2DQ9UEU5 116 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 U3KQE9 123 aa7.34□□□□□ -1.23
ARFGEF1-203ENST00000518230 SORL1Q92673 2214 aa7.34□□□□□ -1.24
ARFGEF1-203ENST00000518230 RHODO00212 210 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 LINC00315P59091 139 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 UNQ9165/PRO28630Q6UXU0 137 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 OR10J6PQ8NGY7 276 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 EEF1AKMT3Q96AZ1 226 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 LINC00477Q96M19 166 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 SNCGO76070 127 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 LY6DQ14210 128 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 ZNF580Q9UK33 172 aa7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 ZNF256Q9Y2P7 627 aaPredicted RBP7.33□□□□□ -1.24
ARFGEF1-203ENST00000518230 ITPR1Q14643 2758 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 TRBV12-3P01733 135 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 SRD5A1P18405 259 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 POLR2KP53803 58 aaKnown RBP7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 Q1RN00 199 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 PAPPA-AS1Q5QFB9 102 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 SUMO4Q6EEV6 95 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 TMEM263Q8WUH6 116 aaKnown RBP7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 KIF25-AS1Q9Y6Z4 181 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 ZNF876PQ49A33 203 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 C11orf71Q6IPW1 123 aa7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 PRRC2AP48634 2157 aaKnown RBP7.32□□□□□ -1.24
ARFGEF1-203ENST00000518230 SDHAF1A6NFY7 115 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 ADARB2-AS1A8MUL3 147 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 FAM74A4Q5TZK3 123 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 C9orf139Q6ZV77 190 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 TMEM219Q86XT9 240 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 LENEPQ9Y5L5 61 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 IGHV1-69DA0A0B4J2H0 117 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 TTC32Q5I0X7 151 aa7.31□□□□□ -1.24
ARFGEF1-203ENST00000518230 TRBV7-1A0A0A6YYK4 115 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 A0A1W2PPR1 153 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 VCYO14598 125 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 PPP1R17O96001 155 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 LINC01620Q4KN68 170 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 MINOS1Q5TGZ0 78 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 TMEM141Q96I45 108 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 MINOS1-NBL1R4GNA1 71 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 HIVEP3Q5T1R4 2406 aa7.3□□□□□ -1.24
ARFGEF1-203ENST00000518230 IGHV4OR15-8A0A075B7B6 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 A0A087WW49 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 OOSP1A8MZH6 123 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 GAGE7O76087 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 GAGE12FP0CL80 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 GAGE12GP0CL81 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 GAGE12IP0CL82 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 GAGE4Q13068 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 ODF3Q96PU9 254 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 OVOL1O14753 267 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 IFITM1P13164 125 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 SAA4P35542 130 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 C15orf53Q8NAA6 179 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 PRORYQ9H606 182 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 CRYBG3Q68DQ2 2970 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 SOCS3O14543 225 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 IGHV3-11P01762 117 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 Q6ZSV7 163 aa7.29□□□□□ -1.24
ARFGEF1-203ENST00000518230 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
ARFGEF1-203ENST00000518230 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
ARFGEF1-203ENST00000518230 TMEM223A0PJW6 202 aa7.28□□□□□ -1.24
ARFGEF1-203ENST00000518230 TRIAP1O43715 76 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms