RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 GADD45GO95257 159 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 TCL1BO95988 128 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 TRGC1P0CF51 173 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 IL7P13232 177 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 FKBP2P26885 142 aaKnown RBP2.12□□□□□ -2.07
CSMD1-203ENST00000518151 CKS1BP61024 79 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 LSM3P62310 102 aaKnown RBP2.12□□□□□ -2.07
CSMD1-203ENST00000518151 ERHP84090 104 aaKnown RBP2.12□□□□□ -2.07
CSMD1-203ENST00000518151 ZNF90Q03938 601 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 RPS27LQ71UM5 84 aaKnown RBP2.12□□□□□ -2.07
CSMD1-203ENST00000518151 PRR15Q8IV56 129 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 PDZD9Q8IXQ8 264 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 OR4E2Q8NGC2 313 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 OR4D11Q8NGI4 311 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 AQP3Q92482 292 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 PRADC1Q9BSG0 188 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 EPDR1Q9UM22 224 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 DNAJC15Q9Y5T4 150 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 V9GYH0 126 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 ABCA4P78363 2273 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 SNRNP200O75643 2136 aaKnown RBP2.12□□□□□ -2.07
CSMD1-203ENST00000518151 MALRD1Q5VYJ5 2156 aa2.12□□□□□ -2.07
CSMD1-203ENST00000518151 KIAA1109Q2LD37 5005 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 INTS1Q8N201 2190 aaKnown RBP2.11□□□□□ -2.07
CSMD1-203ENST00000518151 TENM1Q9UKZ4 2725 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 IGHV3-64A0A075B6Q5 118 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 TRAV36DV7A0A075B6V5 113 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 TRGV10A0A0A0MS01 117 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 PNMA8CA0A1B0GUJ8 204 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 HMSDA8MTL9 139 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 M0QZK8 103 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 LYZL6O75951 148 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 CST7O76096 145 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 NAPSAO96009 420 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 FABP2P12104 132 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 SPINT3P49223 89 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 FXYD2P54710 66 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 LCN15Q6UWW0 184 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 AAED1Q7RTV5 226 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 SLC30A7Q8NEW0 376 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 OR8J3Q8NGG0 315 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 ZNF714Q96N38 554 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 NPCDR1Q9BY65 106 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 TMEM126AQ9H061 195 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 POPDC3Q9HBV1 291 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 NAT8BQ9UHF3 227 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 BAIAP2Q9UQB8 552 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 TPRKBQ9Y3C4 175 aa2.11□□□□□ -2.07
CSMD1-203ENST00000518151 EML6Q6ZMW3 1958 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 MEGF8Q7Z7M0 2845 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 VPS13CQ709C8 3753 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 TMSB15BA0A087X1C1 80 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 MEIS3P1A6NDR6 274 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 ARRDC5A6NEK1 342 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 OVOL1O14753 267 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 CLPSP04118 112 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 PIRTP0C851 137 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 COX6B1P14854 86 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 CMPK1P30085 196 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 AKR1C3P42330 323 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 POLR2JP52435 117 aaKnown RBP2.1□□□□□ -2.07
CSMD1-203ENST00000518151 SLC38A11Q08AI6 406 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 DEFB110Q30KQ9 67 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 SMIM21Q3B7S5 101 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 EIF5AL1Q6IS14 154 aaKnown RBP2.1□□□□□ -2.07
CSMD1-203ENST00000518151 LRRC28Q86X40 367 aaPredicted RBP2.1□□□□□ -2.07
CSMD1-203ENST00000518151 KRTAP13-1Q8IUC0 172 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 C9orf62Q8N4C0 152 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 TMEM229BQ8NBD8 167 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 PSMF1Q92530 271 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 POP5Q969H6 163 aaKnown RBP2.1□□□□□ -2.07
CSMD1-203ENST00000518151 NDUFB11Q9NX14 153 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 SCN3BQ9NY72 215 aa2.1□□□□□ -2.07
CSMD1-203ENST00000518151 MXRA5Q9NR99 2828 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 CHD3Q12873 2000 aaKnown RBP2.09□□□□□ -2.07
CSMD1-203ENST00000518151 A0A096LPI6 279 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 TRAV3A0A0B4J244 114 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 MUC21A0A0G2JKD1 596 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 MUC21A0A140T8X8 626 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 A0A1B0GX51 115 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 C7orf71A4D174 169 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 TMEM189A5PLL7 270 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 E7EQL1 145 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 ATP6V1G2-DDX39BF2Z307 99 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 LINC00032P0C843 101 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 SDC2P34741 201 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
CSMD1-203ENST00000518151 TFF3Q07654 80 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 ZNF791Q3KP31 576 aaPredicted RBP2.09□□□□□ -2.07
CSMD1-203ENST00000518151 CLLU1Q5K131 121 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 OR8I2Q8N0Y5 310 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 C10orf111Q8N326 155 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 TEX29Q8N6K0 151 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 TVP23CQ96ET8 276 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 PFDN5Q99471 154 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 OR2H1Q9GZK4 316 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 SPANXCQ9NY87 97 aa2.09□□□□□ -2.07
CSMD1-203ENST00000518151 NSD1Q96L73 2696 aaPredicted RBP2.09□□□□□ -2.08
CSMD1-203ENST00000518151 HERC2O95714 4834 aa2.09□□□□□ -2.08
CSMD1-203ENST00000518151 DNAJC13O75165 2243 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms